C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001TS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000088277-ENSDARG00000012135 CGP 7955 19:44232330-44285742
GeneTranscriptPositionBiotype
ENSDARG00000012135 (fbxl2)
F-box and leucine-rich repeat protein 2 		ENSDART00000018328 (fbxl2-001) 44262953-44285742 protein_coding
ENSDARG00000083868 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000119268 (5S_rRNA.403-201) 44281159-44281275 rRNA
ENSDARG00000088277 (susd5)
sushi domain containing 5 		ENSDART00000123360 (susd5-001) 44232330-44254410 protein_coding
CIL_0001TS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173705-ENSG00000153558 CGP 9606 3:33150042-33403662
GeneTranscriptPositionBiotype
ENSG00000153558 (FBXL2)
F-box and leucine-rich repeat protein 2 		ENST00000283627 (FBXL2-003) 33277446-33386476 processed_transcript
ENST00000421391 (FBXL2-008) 33277477-33385862 nonsense_mediated_decay
ENST00000422741 (FBXL2-009) 33277476-33386633 nonsense_mediated_decay
ENST00000425973 (FBXL2-017) 33277472-33373319 nonsense_mediated_decay
ENST00000432809 (FBXL2-004) 33277451-33386023 nonsense_mediated_decay
ENST00000435207 (FBXL2-002) 33277445-33385621 nonsense_mediated_decay
ENST00000451636 (FBXL2-005) 33277453-33385948 nonsense_mediated_decay
ENST00000460186 (FBXL2-019) 33372988-33375366 retained_intron
ENST00000461094 (FBXL2-022) 33364336-33373618 retained_intron
ENST00000463698 (FBXL2-018) 33372341-33373639 retained_intron
ENST00000463736 (FBXL2-007) 33277466-33403662 processed_transcript
ENST00000464164 (FBXL2-015) 33289669-33373303 processed_transcript
ENST00000464990 (FBXL2-010) 33382552-33386625 retained_intron
ENST00000471208 (FBXL2-021) 33373276-33373924 retained_intron
ENST00000483037 (FBXL2-013) 33278173-33359358 processed_transcript
ENST00000484457 (FBXL2-001) 33277422-33388092 protein_coding
ENST00000492662 (FBXL2-020) 33373021-33375407 retained_intron
ENST00000493778 (FBXL2-014) 33289650-33373311 processed_transcript
ENST00000497411 (FBXL2-016) 33277445-33373601 retained_intron
ENST00000498807 (FBXL2-012) 33277025-33373295 processed_transcript
ENST00000507198 (FBXL2-006) 33277476-33385762 protein_coding
ENST00000538892 (FBXL2-201) 33277445-33387265 protein_coding
ENSG00000153560 (UBP1)
upstream binding protein 1 (LBP-1a) 		ENST00000283628 (UBP1-003) 33390134-33440510 protein_coding
ENST00000283629 (UBP1-001) 33388336-33440378 protein_coding
ENST00000411650 (UBP1-008) 33396243-33411659 nonsense_mediated_decay
ENST00000447368 (UBP1-002) 33388339-33440010 protein_coding
ENST00000456378 (UBP1-007) 33412726-33440587 protein_coding
ENST00000464787 (UBP1-011) 33392363-33396302 retained_intron
ENST00000466441 (UBP1-005) 33390097-33396621 retained_intron
ENST00000467613 (UBP1-015) 33400962-33412756 processed_transcript
ENST00000481761 (UBP1-009) 33409285-33416820 processed_transcript
ENST00000486388 (UBP1-010) 33390266-33408722 processed_transcript
ENST00000490112 (UBP1-014) 33396582-33400267 retained_intron
ENST00000492136 (UBP1-004) 33388338-33398438 retained_intron
ENST00000496310 (UBP1-006) 33416793-33441371 processed_transcript
ENSG00000173705 (SUSD5)
sushi domain containing 5 		ENST00000309558 (SUSD5-001) 33150042-33219215 protein_coding
ENST00000412539 (SUSD5-002) 33153710-33218793 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TS_0001ENSDARG00000012135ENSDART00000018328ENSDARG00000083868ENSDART00000119268ENSDARG00000088277ENSDART00000123360CIL_0001TS_0002ENSG00000153558ENST00000283627ENST00000421391ENST00000422741ENST00000425973ENST00000432809ENST00000435207ENST00000451636ENST00000460186ENST00000461094ENST00000463698ENST00000463736ENST00000464164ENST00000464990ENST00000471208ENST00000483037ENST00000484457ENST00000492662ENST00000493778ENST00000497411ENST00000498807ENST00000507198ENST00000538892ENSG00000153560ENST00000283628ENST00000283629ENST00000411650ENST00000447368ENST00000456378ENST00000464787ENST00000466441ENST00000467613ENST00000481761ENST00000486388ENST00000490112ENST00000492136ENST00000496310ENSG00000173705ENST00000309558ENST00000412539
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TS_0001ENSDARG00000012135ENSDART00000018328ENSDARG00000083868ENSDART00000119268ENSDARG00000088277ENSDART00000123360CIL_0001TS_0002ENSG00000153558ENST00000283627ENST00000421391ENST00000422741ENST00000432809ENST00000451636ENST00000463736ENST00000464164ENST00000464990ENST00000484457ENST00000497411ENST00000498807ENST00000507198ENST00000538892ENSG00000153560ENST00000283628ENST00000283629ENST00000447368ENST00000467613ENST00000481761ENST00000492136ENST00000496310ENSG00000173705ENST00000309558ENST00000412539
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012135 ENSDART00000018328 N/A N/A N/A 4.893±3.16 N/A N/A 1.515±1.66 3.456±0.57 1.131±0.00 N/A 2.274±0.00 N/A N/A N/A
ENSDARG00000083868 ENSDART00000119268 N/A N/A N/A 9.062±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000088277 ENSDART00000123360 N/A N/A N/A 3.802±4.47 N/A N/A N/A 0.023±0.00 N/A N/A 0.495±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000153558 ENST00000283627 N/A N/A N/A 3.336±0.00 0.369±0.00 N/A N/A 0.947±0.00 N/A 1.311±0.00 N/A 1.563±0.00 1.087±0.23 2.021±0.00
ENST00000421391 N/A N/A N/A 9.460±0.00 N/A N/A N/A N/A 1.295±0.00 N/A N/A 1.026±0.00 N/A N/A
ENST00000422741 N/A N/A N/A 1.939±0.05 N/A 0.896±0.00 N/A 1.575±0.00 N/A 0.333±0.00 N/A 1.735±0.00 0.673±0.28 1.707±0.00
ENST00000425973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432809 0.144±0.00 N/A N/A N/A N/A N/A N/A 0.324±0.00 N/A N/A N/A N/A N/A N/A
ENST00000435207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451636 N/A N/A N/A N/A N/A N/A 0.162±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000460186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463736 0.127±0.00 N/A N/A N/A N/A N/A 0.194±0.00 N/A 0.038±0.00 0.280±0.00 N/A 0.759±0.00 1.004±0.00 3.902±0.00
ENST00000464164 N/A N/A N/A N/A N/A N/A N/A N/A 4.187±0.00 N/A N/A N/A N/A N/A
ENST00000464990 0.047±0.00 N/A N/A 0.808±0.00 N/A N/A N/A N/A 0.530±0.00 0.444±0.00 N/A 0.714±0.20 N/A 2.577±0.00
ENST00000471208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484457 0.142±0.00 0.415±0.00 N/A 1.148±0.00 0.555±0.00 0.275±0.00 0.139±0.06 N/A 0.115±0.06 0.317±0.00 N/A 0.324±0.00 0.262±0.00 N/A
ENST00000492662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497411 N/A N/A 1.900±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498807 N/A N/A N/A N/A 3.573±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507198 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.418±0.00 N/A N/A N/A N/A
ENST00000538892 N/A N/A N/A 2.416±0.00 0.367±0.00 N/A 0.056±0.00 N/A N/A N/A N/A 0.490±0.21 0.520±0.31 1.735±0.00
ENSG00000153560 ENST00000283628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.588±0.00 N/A N/A
ENST00000283629 1.813±0.00 2.865±0.00 N/A 4.249±3.41 4.335±0.00 N/A 3.316±2.52 4.592±0.00 2.679±0.34 3.954±1.78 1.571±0.56 1.602±0.69 1.945±0.65 3.330±0.00
ENST00000411650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447368 8.447±0.00 10.586±0.00 3.322±0.00 2.476±0.18 7.403±2.26 11.813±5.69 3.124±1.97 5.591±2.58 4.750±0.55 4.233±0.00 0.978±0.23 8.321±3.97 6.305±1.19 9.326±1.45
ENST00000456378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.030±0.00 14.696±0.00 23.952±0.00
ENST00000481761 N/A N/A N/A N/A N/A N/A 2.845±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000486388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492136 N/A 1.119±0.00 0.746±0.00 0.655±0.13 2.169±0.00 1.619±0.00 0.368±0.00 N/A 0.791±0.00 N/A N/A 0.992±0.27 N/A 2.201±0.00
ENST00000496310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.114±0.00 N/A N/A N/A
ENSG00000173705 ENST00000309558 0.647±0.00 0.707±0.00 N/A 1.202±0.13 0.139±0.00 0.506±0.00 0.442±0.32 0.715±0.00 0.420±0.00 0.697±0.39 1.175±0.00 0.453±0.27 0.256±0.00 1.352±0.40
ENST00000412539 N/A N/A N/A N/A 0.134±0.00 N/A N/A N/A N/A N/A 0.999±0.00 N/A 0.240±0.00 N/A

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