C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000286096 KDM8-001 ENSG00000155666 9606 + 16:27203495-27221768 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartLiverLungOvaryPlacentaTestisENST00000286096
Transcript ID Adipose Adrenal Breast Heart Liver Lung Ovary Placenta Testis
ENST00000286096 0.275±0.00 1.410±0.00 0.202±0.00 0.258±0.15 4.529±0.00 0.222±0.10 1.447±0.50 0.892±0.39 0.515±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003V9 CIL_0003V9_0002 CGP 16:27203495-27268794

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 IMP G2/M transition of mitotic cell cycle
GO:0003682 IDA chromatin binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0051864 IDA histone demethylase activity (H3-K36 specific)
GO:0055114 IEA oxidation-reduction process
GO:0070544 IDA histone H3-K36 demethylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033010 Kdm8-001 protein_coding Mus_musculus 0 900
ENSMUST00000135129 Kdm8-002 protein_coding Mus_musculus 0 431

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