C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000286344 SLC24A2-002 ENSG00000155886 9606 - 9:19515980-19786928 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonPlacentaTestisENST00000286344
Transcript ID Bladder Colon Placenta Testis
ENST00000286344 0.186±0.00 0.086±0.00 0.038±0.00 0.071±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DB CIL_0007DB_0001 CGP 9:19409059-19786928
CIL_0007D2 CIL_0007D2_0001 CGP 9:19507452-20622543

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0006811 TAS ion transport
GO:0006813 IEA potassium ion transport
GO:0007601 IEA visual perception
GO:0008273 IDA calcium, potassium:sodium antiporter activity
GO:0015293 IEA symporter activity
GO:0016021 IEA integral component of membrane
GO:0034220 IDA ion transmembrane transport
GO:0035725 IDA sodium ion transmembrane transport
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107155 Slc24a2-006 protein_coding Mus_musculus 0 2449
ENSMUST00000107158 Slc24a2-201 protein_coding Mus_musculus 0 1314
ENSMUST00000044990 Slc24a2-005 protein_coding Mus_musculus 0 1286
ENSMUST00000107157 Slc24a2-001 protein_coding Mus_musculus 0 1286
ENSMUST00000134248 Slc24a2-003 processed_transcript Mus_musculus 0 1103
ENSMUST00000155361 Slc24a2-002 processed_transcript Mus_musculus 0 1103
ENSMUST00000134643 Slc24a2-004 processed_transcript Mus_musculus 0 1101
ENSMUST00000140780 Slc24a2-008 processed_transcript Mus_musculus 0 383
ENSMUST00000146815 Slc24a2-007 protein_coding Mus_musculus 0 231

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