C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007D2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000155886-ENSG00000171843 CGP 9606 9:19507452-20622543
GeneTranscriptPositionBiotype
ENSG00000155886 (SLC24A2)
solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 		ENST00000286344 (SLC24A2-002) 19515980-19786928 protein_coding
ENST00000341998 (SLC24A2-001) 19507452-19786928 protein_coding
ENSG00000171843 (MLLT3)
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 		ENST00000380321 (MLLT3-002) 20346406-20382469 protein_coding
ENST00000380323 (MLLT3-006) 20345077-20382487 processed_transcript
ENST00000380338 (MLLT3-001) 20341665-20622543 protein_coding
ENST00000468513 (MLLT3-004) 20360742-20411962 processed_transcript
ENST00000469261 (MLLT3-007) 20346293-20363569 processed_transcript
ENST00000475957 (MLLT3-008) 20362705-20622440 processed_transcript
ENST00000488705 (MLLT3-005) 20346353-20382471 processed_transcript
ENST00000491137 (MLLT3-003) 20360753-20382452 processed_transcript
ENSG00000221744 (AL512635.1)
 ENST00000408817 (AL512635.1-201) 20295004-20295088 miRNA
ENSG00000232158 (RP11-252O2.2)
chromosome 11 open reading frame 98 pseudogene 1 		ENST00000446114 (RP11-252O2.2-001) 19705338-19705655 processed_pseudogene
ENSG00000237088 (RP11-73E6.2)
 ENST00000444895 (RP11-73E6.2-001) 20532552-20533339 processed_pseudogene
ENSG00000237434 (RP11-15P13.1)
 ENST00000414056 (RP11-15P13.1-001) 20331446-20332277 processed_pseudogene
ENSG00000252324 (AL163193.1)
 ENST00000516515 (AL163193.1-201) 20576217-20576301 miRNA
ENSG00000261402 (RP11-378I6.1)
 ENST00000568063 (RP11-378I6.1-001) 19926094-19929937 lincRNA
ENSG00000266224 (AL158077.1)
 ENST00000401371 (AL158077.1-201) 19829753-19829847 miRNA
ENSG00000270712 (RP11-378I6.2)
 ENST00000604443 (RP11-378I6.2-001) 19957394-19958147 processed_pseudogene
ENSG00000277711 (RP11-378I6.3)
 ENST00000611241 (RP11-378I6.3-001) 19967239-19967994 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0007D2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037996-ENSMUSG00000028496 CGP 10090 4:86983124-88033364
GeneTranscriptPositionBiotype
ENSMUSG00000028496 (Mllt3)
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 		ENSMUST00000078090 (Mllt3-001) 87769925-88033364 protein_coding
ENSMUST00000126353 (Mllt3-003) 87772673-87806314 protein_coding
ENSMUST00000128930 (Mllt3-006) 87791853-88033281 processed_transcript
ENSMUST00000134555 (Mllt3-007) 87832781-87874542 processed_transcript
ENSMUST00000141526 (Mllt3-005) 87837419-88032813 retained_intron
ENSMUST00000142454 (Mllt3-004) 87841084-88032813 nonsense_mediated_decay
ENSMUST00000148059 (Mllt3-010) 87773953-87806294 protein_coding
ENSMUST00000149357 (Mllt3-002) 87773916-87806323 protein_coding
ENSMUSG00000037996 (Slc24a2)
solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 		ENSMUST00000044990 (Slc24a2-005) 86991173-87227873 protein_coding
ENSMUST00000107155 (Slc24a2-006) 86991173-87227877 protein_coding
ENSMUST00000107157 (Slc24a2-001) 86983124-87230477 protein_coding
ENSMUST00000107158 (Slc24a2-201) 86983129-87227963 protein_coding
ENSMUST00000134248 (Slc24a2-003) 87072442-87230423 processed_transcript
ENSMUST00000134643 (Slc24a2-004) 87072830-87230422 processed_transcript
ENSMUST00000140780 (Slc24a2-008) 86996136-87011673 processed_transcript
ENSMUST00000146815 (Slc24a2-007) 87028283-87176285 protein_coding
ENSMUST00000155361 (Slc24a2-002) 87175785-87230467 processed_transcript
ENSMUSG00000082443 (Gm12604)
predicted gene 12604 		ENSMUST00000118382 (Gm12604-001) 87580789-87581560 processed_pseudogene
ENSMUSG00000086512 (Gm12600)
predicted gene 12600 		ENSMUST00000146704 (Gm12600-001) 87298362-87301270 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007D2_0001ENSG00000155886ENST00000286344ENST00000341998ENSG00000171843ENST00000380321ENST00000380323ENST00000380338ENST00000468513ENST00000469261ENST00000475957ENST00000488705ENST00000491137ENSG00000221744ENST00000408817ENSG00000232158ENST00000446114ENSG00000237088ENST00000444895ENSG00000237434ENST00000414056ENSG00000252324ENST00000516515ENSG00000261402ENST00000568063ENSG00000266224ENST00000401371ENSG00000270712ENST00000604443ENSG00000277711ENST00000611241CIL_0007D2_0002ENSMUSG00000028496ENSMUST00000078090ENSMUST00000126353ENSMUST00000128930ENSMUST00000134555ENSMUST00000141526ENSMUST00000142454ENSMUST00000148059ENSMUST00000149357ENSMUSG00000037996ENSMUST00000044990ENSMUST00000107155ENSMUST00000107157ENSMUST00000107158ENSMUST00000134248ENSMUST00000134643ENSMUST00000140780ENSMUST00000146815ENSMUST00000155361ENSMUSG00000082443ENSMUST00000118382ENSMUSG00000086512ENSMUST00000146704
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007D2_0001ENSG00000155886ENST00000286344ENST00000341998ENSG00000171843ENST00000380321ENST00000380323ENST00000380338ENST00000475957ENSG00000221744ENST00000408817ENSG00000232158ENST00000446114ENSG00000237088ENST00000444895ENSG00000237434ENST00000414056ENSG00000252324ENST00000516515ENSG00000261402ENST00000568063ENSG00000266224ENST00000401371ENSG00000270712ENST00000604443ENSG00000277711ENST00000611241CIL_0007D2_0002ENSMUSG00000028496ENSMUST00000078090ENSMUST00000126353ENSMUST00000128930ENSMUST00000142454ENSMUST00000148059ENSMUST00000149357ENSMUSG00000037996ENSMUST00000044990ENSMUST00000107155ENSMUST00000107157ENSMUST00000107158ENSMUST00000134643ENSMUST00000146815ENSMUST00000155361ENSMUSG00000082443ENSMUST00000118382ENSMUSG00000086512ENSMUST00000146704
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000155886 ENST00000286344 N/A N/A 0.186±0.00 N/A N/A 0.086±0.00 N/A N/A N/A N/A N/A N/A 0.038±0.00 0.071±0.00
ENST00000341998 N/A N/A 0.039±0.00 9.876±4.58 N/A N/A 0.010±0.00 N/A 0.001±0.00 0.007±0.00 0.007±0.00 0.013±0.00 0.016±0.01 N/A
ENSG00000171843 ENST00000380321 0.997±0.00 N/A N/A 3.634±0.00 N/A 5.179±0.58 1.351±0.09 2.674±0.00 N/A 2.801±0.34 0.560±0.00 3.090±0.40 2.291±0.93 2.266±0.68
ENST00000380323 0.672±0.00 1.361±0.00 N/A 2.209±0.00 1.229±0.05 2.116±0.02 0.647±0.22 0.803±0.62 0.104±0.00 1.004±0.00 N/A 1.727±0.44 1.435±0.33 0.730±0.47
ENST00000380338 0.425±0.00 0.508±0.00 0.866±0.00 1.484±0.52 0.620±0.16 1.054±0.37 0.255±0.02 0.408±0.37 2.019±0.00 0.861±0.34 0.175±0.00 0.795±0.28 0.342±0.08 0.411±0.28
ENST00000468513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475957 0.393±0.00 N/A 0.636±0.00 N/A N/A N/A N/A N/A N/A N/A 1.134±0.00 N/A N/A 0.582±0.00
ENST00000488705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221744 ENST00000408817 1.847±0.00 0.640±0.00 N/A 0.395±0.00 1.119±0.00 3.340±0.00 0.676±0.00 2.953±0.00 2.552±0.00 3.287±0.00 2.308±0.00 N/A N/A 1.140±0.00
ENSG00000232158 ENST00000446114 N/A N/A N/A 0.262±0.06 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000237088 ENST00000444895 N/A 0.104±0.00 0.063±0.00 N/A 0.102±0.00 N/A N/A 0.127±0.00 N/A 0.058±0.02 N/A 0.095±0.01 N/A N/A
ENSG00000237434 ENST00000414056 N/A N/A N/A 0.055±0.00 N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000252324 ENST00000516515 N/A 1.292±0.00 N/A 0.333±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.594±0.00
ENSG00000261402 ENST00000568063 N/A 0.007±0.00 N/A 0.223±0.00 N/A N/A N/A 0.020±0.00 0.026±0.00 N/A N/A 0.123±0.00 0.009±0.00 0.013±0.00
ENSG00000266224 ENST00000401371 0.371±0.00 0.522±0.00 N/A 0.168±0.00 0.482±0.00 1.229±0.00 1.098±0.00 2.445±0.00 0.170±0.00 0.160±0.00 0.180±0.00 N/A N/A 0.481±0.00
ENSG00000270712 ENST00000604443 N/A N/A N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00
ENSG00000277711 ENST00000611241 N/A N/A N/A N/A N/A N/A 0.104±0.00 N/A N/A 0.344±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028496 ENSMUST00000078090 1.470±0.57 1.526±0.39 1.333±0.03 6.114±4.37 1.624±0.49 2.118±0.28 0.545±0.08 0.844±0.22 1.471±1.55 1.884±0.26 3.163±0.28 1.944±0.87 0.439±0.07 0.255±0.08
ENSMUST00000126353 2.379±1.20 N/A 2.115±0.12 N/A 6.660±1.69 4.826±0.60 0.921±0.19 1.465±0.15 4.379±4.73 3.829±0.62 8.131±1.39 2.153±0.52 1.410±0.86 N/A
ENSMUST00000128930 N/A N/A N/A N/A 1.950±0.13 2.100±0.12 0.765±0.11 N/A 0.261±0.09 N/A N/A 1.397±0.03 1.627±0.00 1.207±0.17
ENSMUST00000134555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142454 2.079±0.00 1.738±0.64 N/A N/A 2.094±0.22 3.377±0.82 N/A 1.315±0.26 N/A 1.762±0.00 N/A 3.522±1.20 N/A 1.709±1.02
ENSMUST00000148059 N/A N/A N/A 21.491±0.00 N/A N/A N/A N/A N/A N/A N/A 29.585±0.00 24.748±3.35 20.561±0.00
ENSMUST00000149357 N/A N/A N/A 7.508±0.00 5.026±0.59 N/A 1.443±0.31 N/A 27.840±17.79 N/A 29.661±2.56 11.634±0.00 5.559±1.74 3.531±1.03
ENSMUSG00000037996 ENSMUST00000044990 N/A N/A N/A N/A N/A 0.084±0.03 0.204±0.00 0.011±0.00 N/A 0.115±0.00 N/A 0.119±0.07 N/A N/A
ENSMUST00000107155 N/A N/A N/A N/A N/A N/A 0.204±0.05 0.011±0.00 0.012±0.01 N/A N/A N/A N/A 0.204±0.00
ENSMUST00000107157 0.018±0.01 0.377±0.16 N/A 0.418±0.05 0.008±0.00 N/A 0.169±0.05 0.008±0.00 0.002±0.00 0.057±0.02 0.078±0.03 0.037±0.03 0.001±0.00 0.057±0.05
ENSMUST00000107158 0.014±0.00 N/A 0.009±0.00 9.049±0.00 0.014±0.01 0.027±0.01 N/A N/A 0.002±0.00 N/A 0.086±0.00 0.042±0.02 0.002±0.00 N/A
ENSMUST00000134248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134643 N/A N/A N/A N/A 0.053±0.02 N/A N/A 0.027±0.02 0.021±0.00 0.063±0.02 N/A 0.073±0.00 N/A 0.161±0.00
ENSMUST00000140780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146815 N/A N/A N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A 0.263±0.00 N/A 0.163±0.00
ENSMUST00000155361 0.022±0.00 N/A N/A N/A 0.059±0.00 N/A N/A 0.017±0.00 0.010±0.00 0.110±0.00 N/A 0.137±0.10 N/A N/A
ENSMUSG00000082443 ENSMUST00000118382 N/A N/A N/A N/A N/A N/A 0.164±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086512 ENSMUST00000146704 N/A N/A N/A 0.043±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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