C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007DB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177076-ENSG00000155886 CGP 9606 9:19409059-19786928
GeneTranscriptPositionBiotype
ENSG00000155886 (SLC24A2)
solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 		ENST00000286344 (SLC24A2-002) 19515980-19786928 protein_coding
ENST00000341998 (SLC24A2-001) 19507452-19786928 protein_coding
ENSG00000177076 (ACER2)
alkaline ceramidase 2 		ENST00000340967 (ACER2-001) 19409059-19452020 protein_coding
ENSG00000231909 (MAP1LC3BP1)
microtubule-associated protein 1 light chain 3 beta pseudogene 1 		ENST00000417653 (MAP1LC3BP1-001) 19460926-19461304 transcribed_processed_pseudogene
ENST00000438342 (MAP1LC3BP1-002) 19461160-19464524 processed_transcript
ENSG00000232158 (RP11-252O2.2)
chromosome 11 open reading frame 98 pseudogene 1 		ENST00000446114 (RP11-252O2.2-001) 19705338-19705655 processed_pseudogene
ENSG00000260912 (RP11-363E7.4)
 ENST00000563205 (RP11-363E7.4-001) 19453209-19455173 sense_overlapping

Homo sapiens Ensembl (GRCh38)

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CIL_0007DB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038007-ENSMUSG00000037996 CGP 10090 4:86874396-87230477
GeneTranscriptPositionBiotype
ENSMUSG00000037996 (Slc24a2)
solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 		ENSMUST00000044990 (Slc24a2-005) 86991173-87227873 protein_coding
ENSMUST00000107155 (Slc24a2-006) 86991173-87227877 protein_coding
ENSMUST00000107157 (Slc24a2-001) 86983124-87230477 protein_coding
ENSMUST00000107158 (Slc24a2-201) 86983129-87227963 protein_coding
ENSMUST00000134248 (Slc24a2-003) 87072442-87230423 processed_transcript
ENSMUST00000134643 (Slc24a2-004) 87072830-87230422 processed_transcript
ENSMUST00000140780 (Slc24a2-008) 86996136-87011673 processed_transcript
ENSMUST00000146815 (Slc24a2-007) 87028283-87176285 protein_coding
ENSMUST00000155361 (Slc24a2-002) 87175785-87230467 processed_transcript
ENSMUSG00000038007 (Acer2)
alkaline ceramidase 2 		ENSMUST00000045224 (Acer2-001) 86874396-86920875 protein_coding
ENSMUST00000084433 (Acer2-002) 86874414-86920875 protein_coding
ENSMUST00000128712 (Acer2-003) 86874414-86932491 processed_transcript
ENSMUST00000135874 (Acer2-004) 86930691-86934822 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DB_0001ENSG00000155886ENST00000286344ENST00000341998ENSG00000177076ENST00000340967ENSG00000231909ENST00000417653ENST00000438342ENSG00000232158ENST00000446114ENSG00000260912ENST00000563205CIL_0007DB_0002ENSMUSG00000037996ENSMUST00000044990ENSMUST00000107155ENSMUST00000107157ENSMUST00000107158ENSMUST00000134248ENSMUST00000134643ENSMUST00000140780ENSMUST00000146815ENSMUST00000155361ENSMUSG00000038007ENSMUST00000045224ENSMUST00000084433ENSMUST00000128712ENSMUST00000135874
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DB_0001ENSG00000155886ENST00000286344ENST00000341998ENSG00000177076ENST00000340967ENSG00000231909ENST00000417653ENST00000438342ENSG00000232158ENST00000446114ENSG00000260912ENST00000563205CIL_0007DB_0002ENSMUSG00000037996ENSMUST00000044990ENSMUST00000107155ENSMUST00000107157ENSMUST00000107158ENSMUST00000134643ENSMUST00000146815ENSMUST00000155361ENSMUSG00000038007ENSMUST00000045224ENSMUST00000084433ENSMUST00000128712ENSMUST00000135874
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000155886 ENST00000286344 N/A N/A 0.186±0.00 N/A N/A 0.086±0.00 N/A N/A N/A N/A N/A N/A 0.038±0.00 0.071±0.00
ENST00000341998 N/A N/A 0.039±0.00 9.876±4.58 N/A N/A 0.010±0.00 N/A 0.001±0.00 0.007±0.00 0.007±0.00 0.013±0.00 0.016±0.01 N/A
ENSG00000177076 ENST00000340967 N/A N/A 0.689±0.00 0.536±0.00 0.925±0.00 0.439±0.00 0.167±0.00 0.683±0.35 3.048±2.79 0.954±0.30 0.125±0.03 0.440±0.00 N/A N/A
ENSG00000231909 ENST00000417653 N/A N/A N/A 0.187±0.00 N/A 0.044±0.00 N/A N/A N/A N/A 0.041±0.00 N/A N/A 0.077±0.00
ENST00000438342 N/A 0.147±0.00 N/A 0.285±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.090±0.00
ENSG00000232158 ENST00000446114 N/A N/A N/A 0.262±0.06 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260912 ENST00000563205 7.802±0.00 1.155±0.00 0.492±0.00 0.741±0.12 1.899±0.02 1.028±0.01 1.038±0.59 1.497±0.20 0.625±0.00 0.617±0.31 0.391±0.00 1.344±0.26 5.255±1.43 1.709±0.43
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037996 ENSMUST00000044990 N/A N/A N/A N/A N/A 0.084±0.03 0.204±0.00 0.011±0.00 N/A 0.115±0.00 N/A 0.119±0.07 N/A N/A
ENSMUST00000107155 N/A N/A N/A N/A N/A N/A 0.204±0.05 0.011±0.00 0.012±0.01 N/A N/A N/A N/A 0.204±0.00
ENSMUST00000107157 0.018±0.01 0.377±0.16 N/A 0.418±0.05 0.008±0.00 N/A 0.169±0.05 0.008±0.00 0.002±0.00 0.057±0.02 0.078±0.03 0.037±0.03 0.001±0.00 0.057±0.05
ENSMUST00000107158 0.014±0.00 N/A 0.009±0.00 9.049±0.00 0.014±0.01 0.027±0.01 N/A N/A 0.002±0.00 N/A 0.086±0.00 0.042±0.02 0.002±0.00 N/A
ENSMUST00000134248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134643 N/A N/A N/A N/A 0.053±0.02 N/A N/A 0.027±0.02 0.021±0.00 0.063±0.02 N/A 0.073±0.00 N/A 0.161±0.00
ENSMUST00000140780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146815 N/A N/A N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A 0.263±0.00 N/A 0.163±0.00
ENSMUST00000155361 0.022±0.00 N/A N/A N/A 0.059±0.00 N/A N/A 0.017±0.00 0.010±0.00 0.110±0.00 N/A 0.137±0.10 N/A N/A
ENSMUSG00000038007 ENSMUST00000045224 9.431±4.56 7.532±0.63 141.880±35.94 0.688±0.13 7.305±1.05 2.630±0.53 7.189±0.33 9.307±0.82 3.551±2.46 91.123±26.24 0.590±0.30 2.149±0.71 12.172±12.71 1.453±0.08
ENSMUST00000084433 N/A 1.178±0.00 N/A 0.713±0.00 N/A N/A N/A N/A 0.509±0.00 N/A 0.578±0.32 0.505±0.00 1.684±0.11 0.205±0.00
ENSMUST00000128712 3.461±0.12 6.187±1.90 N/A 2.128±0.97 4.276±1.12 1.790±0.47 4.811±0.00 6.017±0.85 1.501±0.14 82.369±37.97 0.369±0.01 2.013±0.69 17.284±14.19 3.843±0.64
ENSMUST00000135874 N/A N/A N/A 1.745±0.26 N/A 0.734±0.11 N/A N/A 0.485±0.00 N/A N/A 0.114±0.00 1.167±0.22 N/A

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