C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000288616 CABP1-003 ENSG00000157782 9606 + 12:120650085-120667032 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartLiverLungOvaryPlacentaTestisENST00000288616
Transcript ID Adipose Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000288616 0.268±0.00 0.611±0.36 0.111±0.00 0.701±0.00 0.563±0.00 0.103±0.00 0.137±0.00 0.312±0.16 0.417±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0001 VISTA 12:120240385-120840841

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0004857 TAS enzyme inhibitor activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005886 IDA plasma membrane
GO:0008139 ISS nuclear localization sequence binding
GO:0014069 IDA postsynaptic density
GO:0030054 IEA cell junction
GO:0042308 ISS negative regulation of protein import into nucleus
GO:0043086 TAS negative regulation of catalytic activity
GO:0045211 IEA postsynaptic membrane
GO:0048306 IPI calcium-dependent protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031519 Cabp1-001 protein_coding Mus_musculus 0 1059
ENSMUST00000145197 Cabp1-002 nonsense_mediated_decay Mus_musculus 0 989
ENSMUST00000112109 Cabp1-006 protein_coding Mus_musculus 0 957
ENSMUST00000112112 Cabp1-003 protein_coding Mus_musculus 0 758
ENSMUST00000112113 Cabp1-004 protein_coding Mus_musculus 0 758
ENSMUST00000151775 Cabp1-005 processed_transcript Mus_musculus 0 586
ENSDART00000018528 cabp5a-201 protein_coding Danio_rerio 4.99983e-42 176
ENSDART00000144067 cabp5a-001 protein_coding Danio_rerio 4.99983e-42 176

Loading