C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157782 CABP1 9606 + 12:120640552-120667324 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000288616 CABP1-003 120650085-120667032 protein_coding
  ENST00000316803 CABP1-001 120640552-120667311 protein_coding
  ENST00000351200 CABP1-002 120650507-120667035 protein_coding
  ENST00000453000 CABP1-004 120655299-120667324 protein_coding
  ENST00000498082 CABP1-005 120658976-120662414 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000288616ENST00000316803ENST00000351200ENST00000453000ENST00000498082
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000288616 0.268±0.00 N/A N/A N/A 0.611±0.36 0.111±0.00 0.701±0.00 N/A 0.563±0.00 0.103±0.00 N/A 0.137±0.00 0.312±0.16 0.417±0.00
ENST00000316803 N/A N/A 0.430±0.00 74.586±41.53 N/A 1.189±0.00 1.989±0.00 6.994±0.00 0.655±0.00 N/A 0.575±0.00 1.516±1.84 0.458±0.27 0.771±0.13
ENST00000351200 0.261±0.00 N/A N/A N/A N/A 0.756±0.00 N/A N/A 0.453±0.00 0.240±0.00 0.665±0.00 0.194±0.00 0.395±0.18 N/A
ENST00000453000 0.115±0.00 0.828±0.00 N/A 13.063±0.00 0.564±0.30 0.216±0.16 1.256±0.00 N/A 0.100±0.09 N/A 0.074±0.00 0.248±0.06 0.220±0.00 N/A
ENST00000498082 0.057±0.00 0.076±0.00 0.424±0.00 4.758±0.00 0.138±0.00 N/A N/A 0.324±0.00 0.013±0.00 N/A 0.023±0.00 0.082±0.01 0.017±0.00 0.365±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0001 VISTA 12:120240385-120840841

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0004857 TAS enzyme inhibitor activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0005856 IEA cytoskeleton
GO:0005886 IDA plasma membrane
GO:0008139 ISS nuclear localization sequence binding
GO:0009898 IEA cytoplasmic side of plasma membrane
GO:0010651 IEA negative regulation of cell communication by electrical coupling
GO:0014069 IDA postsynaptic density
GO:0019904 IEA protein domain specific binding
GO:0030054 IEA cell junction
GO:0030425 IEA dendrite
GO:0031800 IEA type 3 metabotropic glutamate receptor binding
GO:0042308 ISS negative regulation of protein import into nucleus
GO:0042803 IEA protein homodimerization activity
GO:0043025 IEA neuronal cell body
GO:0043086 TAS negative regulation of catalytic activity
GO:0043234 IEA protein complex
GO:0044325 IEA ion channel binding
GO:0045211 IEA postsynaptic membrane
GO:0048306 IPI calcium-dependent protein binding
GO:0048471 IEA perinuclear region of cytoplasm
GO:1901385 IEA regulation of voltage-gated calcium channel activity
GO:1901386 IEA negative regulation of voltage-gated calcium channel activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019990 cabp1a calcium binding protein 1a protein_coding Danio_rerio
ENSDARG00000033411 cabp1b calcium binding protein 1b protein_coding Danio_rerio
ENSMUSG00000029544 Cabp1 calcium binding protein 1 protein_coding Mus_musculus

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