C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory subunit 9A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000289495 PPP1R9A-201 ENSG00000158528 9606 + 7:94909898-95296415 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000289495
Transcript ID Adrenal Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000289495 0.073±0.00 1.148±0.00 1.093±0.00 0.397±0.00 0.094±0.00 0.367±0.00 0.125±0.03 0.780±0.17 0.378±0.06 1.044±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053J CIL_00053J_0001 CGP 7:94656325-95296415
CIL_00053I CIL_00053I_0001 CGP 7:94907202-95324707

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005739 IEA mitochondrion
GO:0006915 IEA apoptotic process
GO:0006919 IEA activation of cysteine-type endopeptidase activity involved in apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177153 Ppp1r9a-009 nonsense_mediated_decay Mus_musculus 0 3663
ENSMUST00000164110 Ppp1r9a-007 retained_intron Mus_musculus 0 3138
ENSMUST00000035813 Ppp1r9a-001 protein_coding Mus_musculus 0 3138
ENSMUST00000175889 Ppp1r9a-002 protein_coding Mus_musculus 0 3138
ENSMUST00000177456 Ppp1r9a-010 protein_coding Mus_musculus 0 3018
ENSMUST00000176263 Ppp1r9a-006 nonsense_mediated_decay Mus_musculus 0 2182
ENSMUST00000168998 Ppp1r9a-003 protein_coding Mus_musculus 0 2180
ENSMUST00000175962 Ppp1r9a-004 protein_coding Mus_musculus 0 1611
ENSMUST00000177338 Ppp1r9a-005 protein_coding Mus_musculus 0 1519
ENSMUST00000176729 Ppp1r9a-008 nonsense_mediated_decay Mus_musculus 0 1242
ENSMUST00000176136 Ppp1r9a-011 processed_transcript Mus_musculus 0 315

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