C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory (inhibitor) subunit 9A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035813 Ppp1r9a-001 ENSMUSG00000032827 10090 + 6:4903320-5165661 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMuscleOvaryPlacentaENSMUST00000035813
Transcript ID Bladder Brain Liver Muscle Ovary Placenta
ENSMUST00000035813 4.550±0.00 17.134±15.75 1.195±0.92 0.185±0.00 6.248±0.00 0.936±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053J CIL_00053J_0002 CGP 6:4747306-5165661
CIL_00053I CIL_00053I_0002 CGP 6:4902917-5193946

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005856 ISO cytoskeleton
GO:0007015 IPI actin filament organization
GO:0019722 IMP calcium-mediated signaling
GO:0030175 IDA filopodium
GO:0030426 ISO growth cone
GO:0030864 IDA cortical actin cytoskeleton
GO:0031175 ISO neuron projection development
GO:0043197 IDA dendritic spine
GO:0051015 IEA actin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289495 PPP1R9A-201 protein_coding Homo_sapiens 0 3138
ENST00000340694 PPP1R9A-202 protein_coding Homo_sapiens 0 3834
ENST00000413325 PPP1R9A-005 protein_coding Homo_sapiens 0 449
ENST00000422324 PPP1R9A-004 protein_coding Homo_sapiens 0 320
ENST00000424654 PPP1R9A-002 protein_coding Homo_sapiens 0 3140
ENST00000433360 PPP1R9A-003 protein_coding Homo_sapiens 0 2183
ENST00000433881 PPP1R9A-001 protein_coding Homo_sapiens 0 3832
ENST00000456331 PPP1R9A-203 protein_coding Homo_sapiens 0 3138

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