C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory (inhibitor) subunit 9A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177456 Ppp1r9a-010 ENSMUSG00000032827 10090 + 6:4905416-5159817 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastKidneyLungOvaryPlacentaTestisENSMUST00000177456
Transcript ID Adipose Adrenal Breast Kidney Lung Ovary Placenta Testis
ENSMUST00000177456 0.891±0.00 2.694±0.00 0.711±0.05 0.982±0.00 3.828±0.00 4.780±2.33 2.220±0.35 3.627±1.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053J CIL_00053J_0002 CGP 6:4747306-5165661
CIL_00053I CIL_00053I_0002 CGP 6:4902917-5193946

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005856 ISO cytoskeleton
GO:0007015 IPI actin filament organization
GO:0019722 IMP calcium-mediated signaling
GO:0030175 IDA filopodium
GO:0030426 ISO growth cone
GO:0030864 IDA cortical actin cytoskeleton
GO:0031175 ISO neuron projection development
GO:0043197 IDA dendritic spine

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289495 PPP1R9A-201 protein_coding Homo_sapiens 0 3018
ENST00000340694 PPP1R9A-202 protein_coding Homo_sapiens 0 3018
ENST00000413325 PPP1R9A-005 protein_coding Homo_sapiens 0 329
ENST00000422324 PPP1R9A-004 protein_coding Homo_sapiens 0 193
ENST00000424654 PPP1R9A-002 protein_coding Homo_sapiens 0 3018
ENST00000433360 PPP1R9A-003 protein_coding Homo_sapiens 0 2061
ENST00000433881 PPP1R9A-001 protein_coding Homo_sapiens 0 3018
ENST00000456331 PPP1R9A-203 protein_coding Homo_sapiens 0 3018

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