C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: obscurin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000289656 OBSL1-003 ENSG00000124006 9606 - 2:219561747-219571464 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000289656
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000289656 7.612±0.00 10.992±0.00 15.134±0.00 18.700±0.00 9.348±0.00 16.798±0.00 12.492±0.00 6.980±0.00 4.391±3.18 9.540±0.00 71.238±35.16 28.282±3.31 19.879±6.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0001 VISTA 2:219106772-219707284
CIL_00082R CIL_00082R_0001 VISTA 2:219549147-220152579

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113565 Obsl1-010 protein_coding Mus_musculus 0 2435
ENSMUST00000155084 Obsl1-012 protein_coding Mus_musculus 0 2167
ENSMUST00000113567 Obsl1-001 protein_coding Mus_musculus 0 2167
ENSMUST00000127507 Obsl1-005 retained_intron Mus_musculus 0 1866
ENSMUST00000145306 Obsl1-003 retained_intron Mus_musculus 0 1266
ENSMUST00000129403 Obsl1-004 retained_intron Mus_musculus 0 693

Loading