C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: obscurin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145306 Obsl1-003 ENSMUSG00000026211 10090 - 1:75501672-75506452 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryENSMUST00000145306
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary
ENSMUST00000145306 5.533±0.00 30.069±9.77 2.281±0.00 7.729±0.00 4.536±0.80 2.032±0.32 0.850±0.18 0.915±0.79 2.516±0.66 62.130±13.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0002 VISTA 1:75047166-75647630
CIL_00082R CIL_00082R_0002 VISTA 1:75469003-76073592

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289656 OBSL1-003 protein_coding Homo_sapiens 0 1266
ENST00000373873 OBSL1-002 protein_coding Homo_sapiens 0 2473
ENST00000373876 OBSL1-001 protein_coding Homo_sapiens 0 2473
ENST00000404537 OBSL1-014 protein_coding Homo_sapiens 0 2473
ENST00000465149 OBSL1-004 retained_intron Homo_sapiens 0 1901
ENST00000465589 OBSL1-007 processed_transcript Homo_sapiens 0 590
ENST00000603926 OBSL1-016 protein_coding Homo_sapiens 0 2473

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