C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interleukin 10 receptor, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000290200 IL10RB-001 ENSG00000243646 9606 + 21:33266358-33297234 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000290200
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000290200 11.088±0.00 16.084±0.00 1.499±1.01 6.776±4.22 10.969±0.00 3.383±0.00 6.058±4.21 4.899±3.27 7.803±6.44 3.780±0.00 10.390±6.08 48.582±26.94 8.798±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UY CIL_0007UY_0001 VISTA 21:32793653-33396760
CIL_0003TF CIL_0003TF_0001 CGP 21:33229901-33283212
CIL_0000MI CIL_0000MI_0002 CGP 21:33246774-33297234
CIL_0007I0 CIL_0007I0_0001 CGP 21:33266358-33359862

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 TAS receptor activity
GO:0004920 TAS interleukin-10 receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006954 TAS inflammatory response
GO:0006955 TAS immune response
GO:0007165 TAS signal transduction
GO:0016021 TAS integral component of membrane
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0032002 NAS interleukin-28 receptor complex
GO:0051607 IEA defense response to virus
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023691 Il10rb-001 protein_coding Mus_musculus 0 577
ENSMUST00000156133 Il10rb-002 nonsense_mediated_decay Mus_musculus 0 545
ENSMUST00000152729 Il10rb-003 retained_intron Mus_musculus 0 451
ENSMUST00000160764 Gm21970-001 protein_coding Mus_musculus 0 414
ENSMUST00000137612 Il10rb-004 processed_transcript Mus_musculus 0 235
ENSMUST00000144215 Il10rb-005 nonsense_mediated_decay Mus_musculus 1e-39 169

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