C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000MI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075776-ENSDARG00000096495 CGP 7955 1:9987516-10005135
GeneTranscriptPositionBiotype
ENSDARG00000075776 (crfb15)
cytokine receptor family member B15 		ENSDART00000111406 (crfb15-201) 9987516-9991549 protein_coding
ENSDARG00000096495 (crfb15)
cytokine receptor family member B15 		ENSDART00000149931 (crfb15-001) 9993396-10005135 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000MI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000249624-ENSG00000243646 CGP 9606 21:33246774-33297234
GeneTranscriptPositionBiotype
ENSG00000159110 (IFNAR2)
interferon (alpha, beta and omega) receptor 2 		ENST00000342101 (IFNAR2-003) 33230136-33264525 protein_coding
ENST00000342136 (IFNAR2-002) 33229974-33264525 protein_coding
ENST00000382238 (IFNAR2-006) 33230141-33262855 nonsense_mediated_decay
ENST00000382264 (IFNAR2-004) 33229901-33262756 protein_coding
ENST00000404220 (IFNAR2-001) 33229971-33265675 protein_coding
ENST00000413881 (IFNAR2-009) 33230182-33262855 protein_coding
ENST00000417007 (IFNAR2-007) 33248744-33262757 nonsense_mediated_decay
ENST00000420068 (IFNAR2-020) 33229982-33246853 processed_transcript
ENST00000443073 (IFNAR2-010) 33230182-33262855 protein_coding
ENST00000447980 (IFNAR2-008) 33230409-33248854 protein_coding
ENSG00000223799 (IL10RB-AS1)
IL10RB antisense RNA 1 (head to head) 		ENST00000411998 (IL10RB-AS1-001) 33263873-33266260 antisense
ENSG00000243646 (IL10RB)
interleukin 10 receptor, beta 		ENST00000290200 (IL10RB-001) 33266358-33297234 protein_coding
ENST00000422891 (IL10RB-003) 33266382-33296239 nonsense_mediated_decay
ENST00000451065 (IL10RB-004) 33276612-33296350 nonsense_mediated_decay
ENST00000493295 (IL10RB-002) 33267928-33296953 retained_intron
ENST00000498371 (IL10RB-005) 33268282-33288120 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0000MI_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000093701-ENSMUSG00000022969 CGP 10090 16:91391721-91425834
GeneTranscriptPositionBiotype
ENSMUSG00000022969 (Il10rb)
interleukin 10 receptor, beta 		ENSMUST00000023691 (Il10rb-001) 91406235-91425834 protein_coding
ENSMUST00000137612 (Il10rb-004) 91406444-91414632 processed_transcript
ENSMUST00000144215 (Il10rb-005) 91406320-91424924 nonsense_mediated_decay
ENSMUST00000152729 (Il10rb-003) 91406320-91420311 retained_intron
ENSMUST00000156133 (Il10rb-002) 91406164-91425822 nonsense_mediated_decay
ENSMUSG00000022971 (Ifnar2)
interferon (alpha and beta) receptor 2 		ENSMUST00000023693 (Ifnar2-001) 91372783-91405589 protein_coding
ENSMUST00000089042 (Ifnar2-005) 91372899-91405366 protein_coding
ENSMUST00000117836 (Ifnar2-002) 91372850-91394040 protein_coding
ENSMUST00000134491 (Ifnar2-004) 91372841-91393863 protein_coding
ENSMUST00000139503 (Ifnar2-003) 91387789-91391776 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000MI_0001ENSDARG00000075776ENSDART00000111406ENSDARG00000096495ENSDART00000149931CIL_0000MI_0002ENSG00000159110ENST00000342101ENST00000342136ENST00000382238ENST00000382264ENST00000404220ENST00000413881ENST00000417007ENST00000420068ENST00000443073ENST00000447980ENSG00000223799ENST00000411998ENSG00000243646ENST00000290200ENST00000422891ENST00000451065ENST00000493295ENST00000498371CIL_0000MI_0003ENSMUSG00000022969ENSMUST00000023691ENSMUST00000137612ENSMUST00000144215ENSMUST00000152729ENSMUST00000156133ENSMUSG00000022971ENSMUST00000023693ENSMUST00000089042ENSMUST00000117836ENSMUST00000134491ENSMUST00000139503
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000MI_0001ENSDARG00000075776ENSDART00000111406ENSDARG00000096495ENSDART00000149931CIL_0000MI_0002ENSG00000159110ENST00000342101ENST00000342136ENST00000382264ENSG00000223799ENST00000411998ENSG00000243646ENST00000290200ENST00000451065ENST00000493295CIL_0000MI_0003ENSMUSG00000022969ENSMUST00000023691ENSMUST00000144215ENSMUSG00000022971ENSMUST00000023693ENSMUST00000089042ENSMUST00000117836ENSMUST00000134491
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000075776 ENSDART00000111406 N/A N/A N/A N/A N/A N/A 0.175±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000096495 ENSDART00000149931 N/A N/A N/A 0.228±0.20 N/A N/A N/A 0.119±0.00 N/A N/A 0.189±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000159110 ENST00000342101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.690±0.00
ENST00000342136 4.182±0.00 7.325±0.00 0.332±0.00 1.271±0.22 2.548±0.95 1.810±0.56 0.890±0.67 2.003±0.00 1.291±0.16 3.441±0.93 0.241±0.00 2.621±0.96 N/A 2.846±0.00
ENST00000382238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000382264 8.004±0.00 13.739±0.00 N/A 5.245±0.00 5.131±0.00 3.804±0.00 2.476±0.00 4.761±2.52 4.177±0.00 6.217±0.00 N/A 5.280±1.12 N/A N/A
ENST00000404220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223799 ENST00000411998 8.750±0.00 13.118±0.00 N/A 3.368±0.00 N/A 2.342±0.00 1.627±1.22 1.563±0.00 3.724±0.00 7.919±0.00 1.076±0.00 4.191±1.58 11.299±0.00 1.817±0.00
ENSG00000243646 ENST00000290200 11.088±0.00 16.084±0.00 N/A 1.499±1.01 6.776±4.22 10.969±0.00 3.383±0.00 6.058±4.21 4.899±3.27 7.803±6.44 3.780±0.00 10.390±6.08 48.582±26.94 8.798±0.00
ENST00000422891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.840±0.00 34.655±0.00 2.409±0.00
ENST00000493295 N/A N/A N/A N/A N/A 1.184±0.00 N/A N/A N/A 1.844±0.00 N/A N/A N/A N/A
ENST00000498371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022969 ENSMUST00000023691 17.982±8.42 72.150±11.85 20.847±4.33 2.151±0.75 21.710±6.82 26.821±3.53 31.380±7.19 26.904±4.32 14.901±1.12 20.220±2.58 2.854±0.61 23.813±16.40 15.537±6.05 3.218±0.51
ENSMUST00000137612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.677±0.00 N/A N/A
ENSMUST00000152729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022971 ENSMUST00000023693 9.376±3.02 22.814±1.24 6.427±0.36 2.614±1.30 7.515±1.85 5.461±0.00 N/A 5.341±1.23 7.410±2.51 12.620±0.21 0.660±0.27 12.584±5.93 3.181±0.73 0.711±0.18
ENSMUST00000089042 N/A N/A N/A 1.740±0.00 N/A N/A N/A N/A N/A N/A 0.636±0.16 9.891±0.00 3.785±0.90 0.272±0.00
ENSMUST00000117836 43.925±14.26 N/A 21.119±1.03 3.900±0.38 24.299±7.88 N/A 19.434±0.93 17.548±2.45 31.078±6.35 25.559±1.66 2.185±0.55 33.141±13.94 15.647±0.73 2.035±0.22
ENSMUST00000134491 32.839±0.00 137.838±48.39 N/A 8.869±0.00 39.744±0.00 N/A N/A 20.116±0.00 38.557±7.79 33.218±0.00 N/A 36.483±5.94 18.493±1.20 1.305±0.00
ENSMUST00000139503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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