C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor protein complex AP-1, mu 2 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003397 Ap1m2-201 ENSMUSG00000003309 10090 - 9:21295457-21312333 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003397
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003397 3.142±3.12 0.030±0.00 10.261±0.80 0.335±0.10 4.355±1.49 24.448±7.49 0.221±0.00 8.528±2.33 0.084±0.08 8.443±2.66 0.021±0.00 6.756±2.67 18.611±5.75 0.827±0.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000494 CIL_000494_0002 CGP 9:21288463-21312333
CIL_000491 CIL_000491_0002 CGP 9:21295457-21355025

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005802 TAS trans-Golgi network
GO:0006886 TAS intracellular protein transport
GO:0016192 TAS vesicle-mediated transport
GO:0030131 IEA clathrin adaptor complex
GO:0031410 IEA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000034505 ap1m2-001 protein_coding Danio_rerio 0 752
ENSDART00000125176 AP1M2 (1 of 2)-201 protein_coding Danio_rerio 0 745
ENSDART00000053427 AP1M1-201 protein_coding Danio_rerio 0 422
ENST00000250244 AP1M2-002 protein_coding Homo_sapiens 0 1504
ENST00000291439 AP1M1-001 protein_coding Homo_sapiens 0 671
ENST00000429941 AP1M1-002 protein_coding Homo_sapiens 0 514
ENST00000433173 RP3-323B6.1-001 processed_pseudogene Homo_sapiens 0 638
ENST00000444449 AP1M1-004 protein_coding Homo_sapiens 0 303
ENST00000589348 AP1M2-009 protein_coding Homo_sapiens 4e-39 165
ENST00000589571 AP1M2-004 nonsense_mediated_decay Homo_sapiens 0 422
ENST00000589684 AP1M2-006 protein_coding Homo_sapiens 0 848
ENST00000589782 AP1M1-011 protein_coding Homo_sapiens 0 254
ENST00000589822 AP1M1-007 protein_coding Homo_sapiens 0 204
ENST00000589991 AP1M1-006 retained_intron Homo_sapiens 0 230
ENST00000590263 AP1M1-005 protein_coding Homo_sapiens 0 243
ENST00000590756 AP1M1-003 protein_coding Homo_sapiens 0 617
ENST00000590923 AP1M2-001 protein_coding Homo_sapiens 0 1478
ENST00000591240 AP1M2-010 protein_coding Homo_sapiens 0 806
ENST00000591676 AP1M2-003 protein_coding Homo_sapiens 0 531
ENST00000591775 AP1M1-009 protein_coding Homo_sapiens 0 241

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