C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: natriuretic peptide C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000295440 NPPC-001 ENSG00000163273 9606 - 2:231925385-231926328 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartLiverPlacentaTestisENST00000295440
Transcript ID Adrenal Brain Heart Liver Placenta Testis
ENST00000295440 2.840±0.00 3.109±0.00 0.660±0.05 0.755±0.00 0.247±0.09 3.878±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000899 CIL_000899_0001 VISTA 2:231361987-231963495
CIL_0007WD CIL_0007WD_0001 VISTA 2:231362545-231967398
CIL_0007FO CIL_0007FO_0001 CGP 2:231781671-231926403
CIL_0007FN CIL_0007FN_0001 CGP 2:231921820-232344350

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001503 IEA ossification
GO:0003418 ISS growth plate cartilage chondrocyte differentiation
GO:0003419 ISS growth plate cartilage chondrocyte proliferation
GO:0005102 IPI receptor binding
GO:0005179 IEA hormone activity
GO:0005576 IEA extracellular region
GO:0006182 IDA cGMP biosynthetic process
GO:0007168 IDA receptor guanylyl cyclase signaling pathway
GO:0030814 IDA regulation of cAMP metabolic process
GO:0030823 IDA regulation of cGMP metabolic process
GO:0050880 IEA regulation of blood vessel size
GO:0051447 IDA negative regulation of meiotic cell cycle
GO:1900194 IDA negative regulation of oocyte maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027449 Nppc-001 protein_coding Mus_musculus 0 508

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