C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007FN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163273-ENSG00000144535 CGP 9606 2:231921820-232344350
GeneTranscriptPositionBiotype
ENSG00000144535 (DIS3L2)
DIS3 like 3'-5' exoribonuclease 2 		ENST00000273009 (DIS3L2-001) 231961245-232344350 protein_coding
ENST00000325385 (DIS3L2-201) 231961583-232337197 protein_coding
ENST00000390005 (DIS3L2-002) 231961684-232337198 nonsense_mediated_decay
ENST00000409307 (DIS3L2-015) 232014928-232336630 protein_coding
ENST00000409401 (DIS3L2-003) 231961684-232131890 protein_coding
ENST00000417808 (DIS3L2-007) 232335785-232336973 protein_coding
ENST00000418143 (DIS3L2-012) 232334660-232336974 protein_coding
ENST00000424049 (DIS3L2-010) 232163604-232334454 protein_coding
ENST00000429283 (DIS3L2-006) 232328508-232336976 retained_intron
ENST00000433430 (DIS3L2-005) 232014928-232336977 nonsense_mediated_decay
ENST00000434477 (DIS3L2-011) 232333943-232340999 protein_coding
ENST00000441279 (DIS3L2-008) 231961708-232087552 protein_coding
ENST00000445090 (DIS3L2-004) 231961692-232336555 nonsense_mediated_decay
ENST00000464554 (DIS3L2-013) 232015601-232087844 retained_intron
ENST00000470087 (DIS3L2-009) 232015852-232130875 processed_transcript
ENST00000498319 (DIS3L2-014) 232249340-232307778 processed_transcript
ENSG00000163273 (NPPC)
natriuretic peptide C 		ENST00000295440 (NPPC-001) 231925385-231926328 protein_coding
ENST00000409852 (NPPC-002) 231921820-231926403 protein_coding
ENSG00000207626 (MIR562)
microRNA 562 		ENST00000384894 (MIR562-201) 232172653-232172747 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0007FN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026241-ENSMUSG00000053333 CGP 10090 1:86666291-87050095
GeneTranscriptPositionBiotype
ENSMUSG00000026241 (Nppc)
natriuretic peptide type C 		ENSMUST00000027449 (Nppc-001) 86666291-86670571 protein_coding
ENSMUSG00000053333 (Dis3l2)
DIS3 mitotic control homolog (S. cerevisiae)-like 2 		ENSMUST00000065694 (Dis3l2-002) 86703843-87050092 protein_coding
ENSMUST00000168237 (Dis3l2-001) 86703819-87050095 protein_coding
ENSMUST00000186682 (Dis3l2-006) 86857371-86858105 retained_intron
ENSMUST00000188121 (Dis3l2-004) 86703808-86748331 processed_transcript
ENSMUST00000189044 (Dis3l2-005) 86703828-86882439 retained_intron
ENSMUST00000190618 (Dis3l2-003) 86703828-87049195 nonsense_mediated_decay
ENSMUSG00000084106 (Gm6136)
predicted pseudogene 6136 		ENSMUST00000120149 (Gm6136-001) 86908793-86909683 processed_pseudogene
ENSMUSG00000099401 (RP23-26I10.7)
predicted gene 28375 		ENSMUST00000185304 (RP23-26I10.7-001) 86929387-87057596 antisense
ENSMUSG00000100225 (RP24-529L13.1)
predicted gene 29097 		ENSMUST00000190273 (RP24-529L13.1-001) 86764944-86765365 processed_pseudogene
ENSMUSG00000100768 (RP24-529L13.2)
predicted gene 29055 		ENSMUST00000186337 (RP24-529L13.2-001) 86774819-86776528 sense_intronic

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007FN_0001ENSG00000144535ENST00000273009ENST00000325385ENST00000390005ENST00000409307ENST00000409401ENST00000417808ENST00000418143ENST00000424049ENST00000429283ENST00000433430ENST00000434477ENST00000441279ENST00000445090ENST00000464554ENST00000470087ENST00000498319ENSG00000163273ENST00000295440ENST00000409852ENSG00000207626ENST00000384894CIL_0007FN_0002ENSMUSG00000026241ENSMUST00000027449ENSMUSG00000053333ENSMUST00000065694ENSMUST00000168237ENSMUST00000186682ENSMUST00000188121ENSMUST00000189044ENSMUST00000190618ENSMUSG00000084106ENSMUST00000120149ENSMUSG00000099401ENSMUST00000185304ENSMUSG00000100225ENSMUST00000190273ENSMUSG00000100768ENSMUST00000186337
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007FN_0001ENSG00000144535ENST00000273009ENST00000325385ENST00000390005ENST00000409307ENST00000409401ENST00000424049ENST00000433430ENST00000441279ENST00000464554ENSG00000163273ENST00000295440ENST00000409852ENSG00000207626ENST00000384894CIL_0007FN_0002ENSMUSG00000026241ENSMUST00000027449ENSMUSG00000053333ENSMUST00000065694ENSMUST00000168237ENSMUST00000190618ENSMUSG00000084106ENSMUST00000120149ENSMUSG00000099401ENSMUST00000185304ENSMUSG00000100225ENSMUST00000190273ENSMUSG00000100768ENSMUST00000186337
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000144535 ENST00000273009 N/A 1.435±0.00 1.112±0.00 N/A 0.906±0.00 1.041±0.27 0.496±0.00 1.347±0.00 N/A 1.770±0.00 N/A 2.478±0.52 N/A N/A
ENST00000325385 1.874±0.00 2.761±0.00 N/A 2.305±1.23 1.915±0.00 1.157±0.00 1.158±0.51 4.091±0.00 1.977±0.00 1.957±0.00 2.322±0.00 2.990±0.23 2.668±0.00 6.129±0.00
ENST00000390005 N/A N/A N/A N/A 1.998±0.00 N/A N/A N/A 1.276±0.00 N/A 0.369±0.00 4.931±0.00 3.368±0.00 9.070±0.00
ENST00000409307 1.767±0.00 2.292±0.00 N/A N/A 1.015±0.00 1.994±0.00 0.595±0.00 1.067±0.00 N/A 2.337±0.77 1.801±0.00 5.154±0.00 2.266±0.30 N/A
ENST00000409401 N/A N/A N/A N/A 2.814±0.00 N/A 0.950±0.00 N/A 1.165±0.00 1.761±0.00 0.692±0.00 1.718±0.00 N/A N/A
ENST00000417808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424049 2.711±0.00 N/A N/A 6.705±0.00 3.673±0.00 N/A 2.223±0.00 N/A N/A N/A 2.826±0.57 N/A 3.788±0.00 8.453±0.00
ENST00000429283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433430 N/A 1.128±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.919±0.00
ENST00000434477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441279 N/A N/A N/A 4.725±0.00 N/A N/A N/A 1.939±0.00 3.665±0.00 N/A 1.901±0.00 3.771±0.00 N/A N/A
ENST00000445090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.919±0.00 6.912±0.00 25.755±0.00
ENST00000470087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163273 ENST00000295440 N/A 2.840±0.00 N/A 3.109±0.00 N/A N/A 0.660±0.05 N/A 0.755±0.00 N/A N/A N/A 0.247±0.09 3.878±0.00
ENST00000409852 N/A 0.348±0.00 0.064±0.00 0.887±0.09 0.012±0.00 N/A 0.210±0.00 N/A N/A N/A N/A 0.298±0.24 0.269±0.19 1.003±0.00
ENSG00000207626 ENST00000384894 N/A 0.572±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026241 ENSMUST00000027449 0.695±0.47 0.211±0.06 0.064±0.02 1.668±0.31 0.395±0.07 0.129±0.10 0.055±0.03 0.053±0.03 0.045±0.04 0.091±0.05 0.301±0.16 20.803±10.74 5.457±2.26 0.110±0.07
ENSMUSG00000053333 ENSMUST00000065694 4.265±1.76 6.364±1.25 4.492±0.83 6.106±3.58 2.517±0.72 3.857±0.44 1.411±0.82 5.624±1.49 3.607±1.01 4.653±0.84 0.853±0.21 4.932±2.38 2.711±1.24 10.466±3.22
ENSMUST00000168237 1.624±0.43 1.359±0.39 1.897±0.13 5.428±1.93 2.638±1.80 0.946±0.00 1.700±0.20 2.488±0.41 1.137±0.22 2.245±0.42 3.179±0.18 6.058±3.09 1.210±0.43 4.222±0.87
ENSMUST00000186682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190618 N/A N/A N/A N/A 1.235±0.36 0.645±0.00 N/A N/A N/A 0.985±0.00 N/A N/A N/A N/A
ENSMUSG00000084106 ENSMUST00000120149 11.532±2.44 3.814±1.33 52.198±2.29 12.775±9.04 7.490±2.49 3.949±0.91 2.845±0.51 4.702±1.05 13.806±26.26 4.696±0.55 0.182±0.09 13.457±9.14 0.356±0.23 1.524±0.19
ENSMUSG00000099401 ENSMUST00000185304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.094±0.08 N/A
ENSMUSG00000100225 ENSMUST00000190273 0.397±0.13 0.169±0.00 0.152±0.12 0.145±0.03 0.212±0.09 0.186±0.00 0.187±0.13 0.369±0.24 0.131±0.11 0.128±0.02 N/A 0.650±0.46 0.143±0.09 0.324±0.15
ENSMUSG00000100768 ENSMUST00000186337 1.226±0.25 0.465±0.16 4.335±0.80 10.924±2.94 1.215±0.61 0.719±0.19 1.239±0.25 1.322±0.15 2.163±0.87 1.864±0.57 0.404±0.10 2.417±1.61 3.480±0.33 18.617±1.66

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