C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock 70kDa protein 4-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000296464 HSPA4L-001 ENSG00000164070 9606 + 4:127782140-127840733 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296464
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296464 0.255±0.00 0.343±0.00 0.534±0.00 2.964±0.00 0.620±0.35 1.023±0.47 0.531±0.06 0.967±0.00 0.473±0.01 0.595±0.00 0.149±0.00 0.370±0.22 0.108±0.03 3.135±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RF CIL_0008RF_0001 VISTA 4:127185130-127786590
CIL_0007AI CIL_0007AI_0001 CGP 4:127730378-127840733
CIL_0007AJ CIL_0007AJ_0001 CGP 4:127781821-127899195

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IEA cell morphogenesis
GO:0005515 IEA protein binding
GO:0005524 ISS ATP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005829 IDA cytosol
GO:0006457 ISS protein folding
GO:0006986 ISS response to unfolded protein

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077083 Hspa4l-001 protein_coding Mus_musculus 0 3123
ENSMUST00000108086 Hspa4l-004 protein_coding Mus_musculus 0 2920
ENSMUST00000159819 Hspa4l-003 protein_coding Mus_musculus 0 2091
ENSMUST00000161806 Hspa4l-002 retained_intron Mus_musculus 0 579
ENSMUST00000160026 Hspa4l-007 retained_intron Mus_musculus 0 560
ENSMUST00000162279 Hspa4l-005 protein_coding Mus_musculus 0 503
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000009 66
ENSMUST00000116286 Stk40-201 protein_coding Mus_musculus 0.0002 55
ENSMUST00000127092 Stk40-002 processed_transcript Mus_musculus 0.0002 55

Loading