C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock protein 4 like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000077083 Hspa4l-001 ENSMUSG00000025757 10090 + 3:40745430-40796103 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000077083
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077083 1.105±0.26 3.170±1.20 1.687±0.10 4.197±0.78 1.340±0.38 2.016±0.13 2.588±0.39 1.823±0.65 1.848±0.88 4.145±0.63 0.165±0.06 2.130±0.91 1.605±0.78 11.193±2.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RF CIL_0008RF_0002 VISTA 3:40152073-40754343
CIL_0007AI CIL_0007AI_0002 CGP 3:40708855-40796103
CIL_0007AJ CIL_0007AJ_0002 CGP 3:40744495-40816883

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA:ISS ATP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005829 IEA cytosol
GO:0006457 ISS protein folding
GO:0006986 ISS response to unfolded protein

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296464 HSPA4L-001 protein_coding Homo_sapiens 0 3123
ENST00000505726 HSPA4L-002 protein_coding Homo_sapiens 0 2861
ENST00000508549 HSPA4L-004 protein_coding Homo_sapiens 0 1519
ENST00000508776 HSPA4L-003 protein_coding Homo_sapiens 0 3068

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