C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007AJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164070-ENSG00000142731 CGP 9606 4:127781821-127899195
GeneTranscriptPositionBiotype
ENSG00000142731 (PLK4)
polo-like kinase 4 		ENST00000270861 (PLK4-001) 127880861-127899195 protein_coding
ENST00000503914 (PLK4-007) 127880899-127883470 retained_intron
ENST00000507249 (PLK4-005) 127880929-127898800 protein_coding
ENST00000507454 (PLK4-011) 127890997-127892693 retained_intron
ENST00000508113 (PLK4-009) 127891171-127898486 protein_coding
ENST00000510192 (PLK4-010) 127893200-127898542 retained_intron
ENST00000510605 (PLK4-008) 127887334-127891194 retained_intron
ENST00000511942 (PLK4-006) 127880893-127883516 processed_transcript
ENST00000513090 (PLK4-003) 127880927-127898639 protein_coding
ENST00000514379 (PLK4-002) 127881232-127898579 protein_coding
ENST00000515069 (PLK4-004) 127880909-127899067 protein_coding
ENSG00000164070 (HSPA4L)
heat shock 70kDa protein 4-like 		ENST00000296464 (HSPA4L-001) 127782140-127840733 protein_coding
ENST00000505726 (HSPA4L-002) 127783549-127832968 protein_coding
ENST00000508549 (HSPA4L-004) 127782322-127820469 protein_coding
ENST00000508776 (HSPA4L-003) 127781821-127833042 protein_coding
ENST00000515262 (HSPA4L-005) 127813018-127820521 processed_transcript
ENSG00000251821 (RNU6-583P)
RNA, U6 small nuclear 583, pseudogene 		ENST00000516012 (RNU6-583P-201) 127891991-127892082 snRNA
ENSG00000261668 (RP11-50D9.3)
 ENST00000565254 (RP11-50D9.3-001) 127840198-127844040 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0007AJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025757-ENSMUSG00000025758 CGP 10090 3:40744495-40816883
GeneTranscriptPositionBiotype
ENSMUSG00000025757 (Hspa4l)
heat shock protein 4 like 		ENSMUST00000077083 (Hspa4l-001) 40745430-40796103 protein_coding
ENSMUST00000108086 (Hspa4l-004) 40745868-40789584 protein_coding
ENSMUST00000159819 (Hspa4l-003) 40745382-40781598 protein_coding
ENSMUST00000160026 (Hspa4l-007) 40784010-40786820 retained_intron
ENSMUST00000161806 (Hspa4l-002) 40745583-40758596 retained_intron
ENSMUST00000162279 (Hspa4l-005) 40744495-40757069 protein_coding
ENSMUST00000162743 (Hspa4l-006) 40772644-40781840 protein_coding
ENSMUSG00000025758 (Plk4)
polo-like kinase 4 		ENSMUST00000026858 (Plk4-001) 40800019-40816883 protein_coding
ENSMUST00000166936 (Plk4-008) 40801463-40802044 retained_intron
ENSMUST00000167556 (Plk4-005) 40800254-40816417 protein_coding
ENSMUST00000168287 (Plk4-002) 40800054-40816883 protein_coding
ENSMUST00000168363 (Plk4-003) 40800028-40808413 retained_intron
ENSMUST00000169566 (Plk4-006) 40800781-40805013 protein_coding
ENSMUST00000170825 (Plk4-004) 40800050-40806065 protein_coding
ENSMUST00000171538 (Plk4-007) 40812738-40816882 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007AJ_0001ENSG00000142731ENST00000270861ENST00000503914ENST00000507249ENST00000507454ENST00000508113ENST00000510192ENST00000510605ENST00000511942ENST00000513090ENST00000514379ENST00000515069ENSG00000164070ENST00000296464ENST00000505726ENST00000508549ENST00000508776ENST00000515262ENSG00000251821ENST00000516012ENSG00000261668ENST00000565254CIL_0007AJ_0002ENSMUSG00000025757ENSMUST00000077083ENSMUST00000108086ENSMUST00000159819ENSMUST00000160026ENSMUST00000161806ENSMUST00000162279ENSMUST00000162743ENSMUSG00000025758ENSMUST00000026858ENSMUST00000166936ENSMUST00000167556ENSMUST00000168287ENSMUST00000168363ENSMUST00000169566ENSMUST00000170825ENSMUST00000171538
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007AJ_0001ENSG00000142731ENST00000270861ENST00000503914ENST00000507249ENST00000507454ENST00000508113ENST00000510192ENST00000510605ENST00000511942ENST00000513090ENST00000514379ENST00000515069ENSG00000164070ENST00000296464ENST00000505726ENST00000508549ENST00000508776ENSG00000251821ENST00000516012ENSG00000261668ENST00000565254CIL_0007AJ_0002ENSMUSG00000025757ENSMUST00000077083ENSMUST00000108086ENSMUST00000159819ENSMUST00000160026ENSMUST00000161806ENSMUST00000162279ENSMUSG00000025758ENSMUST00000026858ENSMUST00000167556ENSMUST00000168287ENSMUST00000168363ENSMUST00000170825ENSMUST00000171538
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000142731 ENST00000270861 N/A N/A N/A N/A N/A 0.337±0.00 0.023±0.00 N/A N/A N/A N/A 0.139±0.00 0.371±0.03 N/A
ENST00000503914 N/A N/A N/A N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000507249 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A 0.139±0.00 0.251±0.00 N/A
ENST00000507454 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.837±0.00 N/A N/A N/A N/A
ENST00000508113 N/A N/A N/A N/A N/A 0.241±0.00 N/A 0.450±0.00 N/A N/A N/A N/A N/A N/A
ENST00000510192 0.217±0.00 N/A N/A N/A N/A N/A N/A 0.178±0.00 N/A N/A N/A N/A N/A N/A
ENST00000510605 N/A N/A N/A N/A N/A 1.718±0.00 0.121±0.00 0.375±0.00 0.083±0.00 N/A N/A 5.175±0.00 2.557±0.00 15.399±0.00
ENST00000511942 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.673±0.00 N/A N/A N/A N/A
ENST00000513090 0.176±0.00 N/A N/A N/A 0.026±0.00 0.165±0.00 N/A N/A N/A 0.057±0.00 N/A 1.044±0.35 0.302±0.00 6.886±2.15
ENST00000514379 N/A N/A 0.028±0.00 N/A N/A N/A N/A 0.137±0.00 N/A N/A 0.021±0.00 0.373±0.31 N/A 1.900±0.00
ENST00000515069 0.080±0.00 0.437±0.00 N/A 0.506±0.00 0.251±0.03 N/A 0.082±0.00 0.046±0.00 0.199±0.18 0.016±0.00 N/A 1.094±0.78 1.173±0.00 2.441±0.20
ENSG00000164070 ENST00000296464 0.255±0.00 0.343±0.00 0.534±0.00 2.964±0.00 0.620±0.35 1.023±0.47 0.531±0.06 0.967±0.00 0.473±0.01 0.595±0.00 0.149±0.00 0.370±0.22 0.108±0.03 3.135±0.00
ENST00000505726 0.362±0.00 N/A 2.596±0.00 6.420±0.00 1.846±0.00 N/A 0.520±0.00 0.235±0.00 0.830±0.00 0.808±0.00 0.244±0.13 0.455±0.32 N/A N/A
ENST00000508549 N/A N/A 1.102±0.00 N/A N/A N/A N/A 0.830±0.00 N/A 0.703±0.00 N/A N/A N/A N/A
ENST00000508776 N/A N/A N/A 4.684±0.00 N/A 2.047±0.00 0.854±0.31 4.081±0.00 N/A 1.062±0.00 N/A 0.658±0.45 0.238±0.12 46.094±7.33
ENST00000515262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251821 ENST00000516012 N/A N/A N/A 0.715±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000261668 ENST00000565254 N/A N/A N/A N/A 0.148±0.00 0.712±0.00 N/A N/A 0.226±0.00 N/A N/A N/A 0.051±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025757 ENSMUST00000077083 1.105±0.26 3.170±1.20 1.687±0.10 4.197±0.78 1.340±0.38 2.016±0.13 2.588±0.39 1.823±0.65 1.848±0.88 4.145±0.63 0.165±0.06 2.130±0.91 1.605±0.78 11.193±2.86
ENSMUST00000108086 N/A N/A 1.322±0.20 14.650±12.42 N/A N/A N/A N/A 1.778±0.68 N/A 0.708±0.20 7.659±1.64 3.322±2.11 90.513±79.05
ENSMUST00000159819 1.145±0.31 5.032±2.49 N/A N/A 1.039±0.07 2.564±1.31 1.857±0.20 1.564±0.10 0.977±0.13 3.525±1.76 N/A 4.041±0.36 N/A 52.399±5.60
ENSMUST00000160026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.134±0.00 5.474±2.31 451.688±0.00
ENSMUST00000161806 N/A 14.196±2.56 N/A N/A 2.582±0.00 3.508±0.63 N/A N/A N/A N/A N/A 6.200±3.37 N/A N/A
ENSMUST00000162279 N/A 14.888±0.00 N/A N/A N/A N/A N/A N/A 1.773±0.00 N/A N/A 3.916±0.00 N/A N/A
ENSMUST00000162743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025758 ENSMUST00000026858 0.365±0.07 0.462±0.16 1.329±0.28 5.136±0.79 N/A 0.644±0.24 N/A 0.328±0.00 7.332±6.91 0.525±0.05 0.047±0.00 2.041±0.95 7.723±4.29 10.484±5.18
ENSMUST00000166936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167556 N/A N/A N/A 0.603±0.00 N/A N/A N/A N/A 2.970±2.83 N/A 0.105±0.06 1.249±0.19 7.886±0.11 7.804±4.67
ENSMUST00000168287 0.393±0.00 0.395±0.07 N/A N/A 0.902±0.00 0.899±0.17 0.140±0.00 0.297±0.00 N/A 0.247±0.00 0.079±0.00 1.680±0.84 N/A N/A
ENSMUST00000168363 N/A 0.267±0.00 N/A 0.663±0.34 0.499±0.39 0.384±0.07 0.045±0.00 0.199±0.06 0.091±0.06 0.395±0.20 0.053±0.03 0.410±0.00 N/A N/A
ENSMUST00000169566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170825 N/A 0.753±0.29 N/A 0.424±0.00 N/A 0.971±0.00 N/A 0.316±0.00 0.250±0.12 N/A 0.074±0.03 N/A 2.477±1.26 7.751±0.00
ENSMUST00000171538 2.078±0.00 0.528±0.07 N/A N/A 1.291±0.00 N/A 0.362±0.10 N/A 0.263±0.14 N/A 0.437±0.00 1.729±0.00 N/A N/A

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