C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transformer 2 alpha homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000297071 TRA2A-001 ENSG00000164548 9606 - 7:23504780-23532041 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000297071
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000297071 9.179±0.00 12.879±0.00 2.039±0.00 7.419±0.00 11.068±0.00 11.476±0.00 6.515±0.00 9.323±0.00 4.538±0.31 8.701±0.00 4.282±0.83 13.816±8.10 12.105±1.83 16.289±3.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022J CIL_00022J_0001 CGP 7:23310209-23532041
CIL_0002CW CIL_0002CW_0001 CGP 7:23504780-23644708

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000398 IDA mRNA splicing, via spliceosome
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031841 Tra2a-201 protein_coding Mus_musculus 0 1190

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