C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor necrosis factor receptor superfamily, member 11b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000297350 TNFRSF11B-001 ENSG00000164761 9606 - 8:118923557-118952200 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000297350
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000297350 0.496±0.00 1.458±0.00 0.914±0.00 0.297±0.20 2.010±0.58 0.227±0.00 0.564±0.32 3.820±2.63 0.458±0.28 1.595±0.00 3.709±2.70 2.321±0.21 0.204±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005I4 CIL_0005I4_0001 CGP 8:118923557-119106582

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 TAS skeletal system development
GO:0004872 TAS receptor activity
GO:0005125 TAS cytokine activity
GO:0005515 IEA protein binding
GO:0005576 TAS extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IDA extracellular space
GO:0006915 IEA apoptotic process
GO:0007165 IEA signal transduction
GO:0007584 IEA response to nutrient
GO:0010035 IEA response to inorganic substance
GO:0030198 IEA extracellular matrix organization
GO:0032026 IEA response to magnesium ion
GO:0042489 IEA negative regulation of odontogenesis of dentin-containing tooth
GO:0042493 IEA response to drug
GO:0043627 IEA response to estrogen
GO:0045779 IEA negative regulation of bone resorption
GO:0046685 IEA response to arsenic-containing substance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079772 Tnfrsf11b-201 protein_coding Mus_musculus 0 1288

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