C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005I4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164761-ENSG00000184374 CGP 9606 8:118923557-119106582
GeneTranscriptPositionBiotype
ENSG00000164761 (TNFRSF11B)
tumor necrosis factor receptor superfamily, member 11b
ENST00000297350 (TNFRSF11B-001) 118923557-118952200 protein_coding
ENST00000517352 (TNFRSF11B-002) 118926510-118951883 nonsense_mediated_decay
ENST00000521597 (TNFRSF11B-003) 118924475-118929073 retained_intron
ENSG00000184374 (COLEC10)
collectin sub-family member 10 (C-type lectin)
ENST00000332843 (COLEC10-001) 119067241-119106582 protein_coding
ENST00000521788 (COLEC10-002) 118995452-119103867 processed_transcript
ENSG00000254247 (RP11-278I4.1)
ENST00000522216 (RP11-278I4.1-001) 118982579-118982875 processed_pseudogene
ENSG00000254278 (RP11-278I4.2)
ENST00000518362 (RP11-278I4.2-001) 119062942-119068782 antisense
CIL_0005I4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063727-ENSMUSG00000038591 CGP 10090 15:54250619-54466358
GeneTranscriptPositionBiotype
ENSMUSG00000038591 (Colec10)
collectin sub-family member 10
ENSMUST00000036737 (Colec10-201) 54410774-54466358 protein_coding
ENSMUSG00000050978 (Gm5215)
predicted gene 5215
ENSMUST00000054380 (Gm5215-201) 54311961-54312365 processed_pseudogene
ENSMUSG00000063727 (Tnfrsf11b)
tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)
ENSMUST00000079772 (Tnfrsf11b-201) 54250619-54278484 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005I4_0001ENSG00000164761ENST00000297350ENST00000517352ENST00000521597ENSG00000184374ENST00000332843ENST00000521788ENSG00000254247ENST00000522216ENSG00000254278ENST00000518362CIL_0005I4_0002ENSMUSG00000038591ENSMUST00000036737ENSMUSG00000050978ENSMUST00000054380ENSMUSG00000063727ENSMUST00000079772
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005I4_0001ENSG00000164761ENST00000297350ENST00000517352ENST00000521597ENSG00000184374ENST00000332843ENST00000521788ENSG00000254247ENST00000522216ENSG00000254278ENST00000518362CIL_0005I4_0002ENSMUSG00000038591ENSMUST00000036737ENSMUSG00000050978ENSMUST00000054380ENSMUSG00000063727ENSMUST00000079772
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164761 ENST00000297350 0.496±0.00 1.458±0.00 0.914±0.00 0.297±0.20 2.010±0.58 0.227±0.00 0.564±0.32 3.820±2.63 0.458±0.28 1.595±0.00 N/A 3.709±2.70 2.321±0.21 0.204±0.12
ENST00000517352 N/A N/A N/A 0.415±0.00 N/A N/A N/A N/A N/A 4.265±0.00 N/A N/A N/A 0.176±0.12
ENST00000521597 1.119±0.00 0.957±0.00 1.520±0.00 0.722±0.00 3.240±1.30 0.275±0.01 1.082±0.00 5.729±0.00 0.682±0.00 N/A N/A 7.534±6.59 3.387±2.15 0.339±0.00
ENSG00000184374 ENST00000332843 0.030±0.00 N/A N/A 0.152±0.00 0.050±0.01 N/A 0.199±0.00 0.034±0.00 4.217±0.00 0.532±0.05 N/A 0.092±0.05 2.419±1.62 0.041±0.02
ENST00000521788 N/A N/A N/A 0.041±0.00 N/A N/A 0.060±0.00 0.038±0.00 N/A N/A N/A 0.032±0.00 N/A 0.023±0.00
ENSG00000254247 ENST00000522216 N/A N/A N/A N/A 0.814±0.00 N/A 2.265±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000254278 ENST00000518362 N/A N/A 0.126±0.00 0.021±0.00 0.032±0.00 N/A 0.021±0.01 0.229±0.20 0.011±0.00 N/A N/A N/A 0.026±0.00 0.012±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038591 ENSMUST00000036737 0.018±0.01 N/A 0.218±0.00 0.006±0.00 0.038±0.02 0.940±0.17 0.016±0.01 N/A 6.217±1.30 0.041±0.02 N/A 0.034±0.03 2.269±2.89 0.054±0.03
ENSMUSG00000050978 ENSMUST00000054380 N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000063727 ENSMUST00000079772 2.773±0.71 2.281±0.19 1.798±0.72 0.383±0.11 0.350±0.05 1.852±0.23 0.261±0.07 0.218±0.04 1.667±0.62 1.203±0.20 0.099±0.05 1.249±0.33 7.113±5.67 0.036±0.02

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