C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane channel-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000297784 TMC1-001 ENSG00000165091 9606 + 9:72521801-72836351 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyOvaryPlacentaTestisENST00000297784
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Ovary Placenta Testis
ENST00000297784 0.022±0.00 0.039±0.00 0.102±0.00 0.038±0.00 0.035±0.00 0.053±0.00 0.018±0.00 0.117±0.00 0.316±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QU CIL_0007QU_0001 VISTA 9:72062282-72663099

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005245 IEA voltage-gated calcium channel activity
GO:0009897 IEA external side of plasma membrane
GO:0016021 IEA integral component of membrane
GO:0032426 IEA stereocilium bundle tip
GO:0050910 IEA detection of mechanical stimulus involved in sensory perception of sound
GO:0060005 IEA vestibular reflex
GO:0060117 IEA auditory receptor cell development
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039500 Tmc1-201 protein_coding Mus_musculus 0 2691

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