C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat and fibronectin type III domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000298119 LRFN5-001 ENSG00000165379 9606 + 14:41607570-41904549 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000298119
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000298119 0.176±0.00 0.120±0.00 3.978±0.68 0.596±0.30 0.307±0.16 0.115±0.00 0.266±0.00 0.532±0.00 0.198±0.17 0.179±0.03 0.522±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VL CIL_0003VL_0001 CGP 14:39397669-41904549

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119481 Lrfn5-001 protein_coding Mus_musculus 0 4150
ENSMUST00000055815 Lrfn5-004 protein_coding Mus_musculus 0 3685
ENSMUST00000138980 Lrfn5-003 processed_transcript Mus_musculus 0 874
ENSMUST00000130887 Lrfn5-002 processed_transcript Mus_musculus 0 756
ENSMUST00000189933 Lrfn5-005 retained_intron Mus_musculus 0 399

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