C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat and fibronectin type III domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119481 Lrfn5-001 ENSMUSG00000035653 10090 + 12:61523948-61857928 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverMuscleOvaryPlacentaENSMUST00000119481
Transcript ID Bladder Brain Breast Colon Heart Liver Muscle Ovary Placenta
ENSMUST00000119481 0.060±0.01 8.996±2.16 0.016±0.01 0.073±0.04 0.008±0.00 0.031±0.02 0.024±0.01 0.029±0.00 0.006±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VL CIL_0003VL_0002 CGP 12:59200655-61858342

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298119 LRFN5-001 protein_coding Homo_sapiens 0 4150
ENST00000553926 LRFN5-004 processed_transcript Homo_sapiens 0 243
ENST00000554120 LRFN5-006 protein_coding Homo_sapiens 0 2274
ENST00000554171 LRFN5-003 protein_coding Homo_sapiens 0 2071
ENST00000555279 LRFN5-005 processed_transcript Homo_sapiens 0 353

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