C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 35 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000299138 VPS35-001 ENSG00000069329 9606 - 16:46656132-46689192 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299138
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299138 3.039±0.00 2.431±0.00 2.778±1.25 3.198±0.00 1.849±0.78 1.592±0.58 2.639±0.00 1.429±0.00 2.427±0.40 2.123±0.00 2.717±0.96 1.886±0.20 3.664±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VM CIL_0002VM_0001 CGP 16:46656132-46698394

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005765 IDA lysosomal membrane
GO:0005768 IDA endosome
GO:0005829 IDA cytosol
GO:0008219 IEA cell death
GO:0015031 IEA protein transport
GO:0030904 IEA retromer complex
GO:0042147 NAS:IEA retrograde transport, endosome to Golgi
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034131 Vps35-201 protein_coding Mus_musculus 0 3779

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