C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000299543 CTDP1-201 ENSG00000060069 9606 + 18:79681430-79754510 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000299543
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000299543 2.442±0.00 3.188±0.00 0.504±0.00 0.706±0.03 1.259±0.67 0.988±0.00 0.640±0.35 0.641±0.00 1.263±0.16 1.514±0.00 2.827±1.40 4.761±0.80 14.254±5.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y9 CIL_0007Y9_0001 VISTA 18:79552100-80156263

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0005515 IEA protein binding
GO:0005634 IDA:IEA nucleus
GO:0015629 IDA actin cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036229 Ctdp1-001 protein_coding Mus_musculus 0 977
ENSDART00000111517 ctdp1-201 protein_coding Danio_rerio 0 472
ENSDART00000148516 ctdp1-001 protein_coding Danio_rerio 0 472
ENSMUST00000161003 Ctdp1-003 protein_coding Mus_musculus 1e-32 147

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