C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATM interactor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000299575 ATMIN-001 ENSG00000166454 9606 + 16:81035847-81047358 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299575
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299575 8.695±0.00 5.709±0.00 1.610±0.00 11.168±0.13 4.277±2.27 3.699±0.01 4.145±1.16 4.198±1.68 4.592±1.25 2.092±0.37 3.794±0.03 4.748±1.87 11.088±5.04 11.477±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QV CIL_0001QV_0001 CGP 16:81006498-81047358
CIL_0001QN CIL_0001QN_0001 CGP 16:81035847-81077267

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0044212 IEA transcription regulatory region DNA binding
GO:0045502 IPI dynein binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109099 Atmin-001 protein_coding Mus_musculus 0 1988

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