C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001QN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166454-ENSG00000166455 CGP 9606 16:81035847-81077267
GeneTranscriptPositionBiotype
ENSG00000166454 (ATMIN)
ATM interactor 		ENST00000299575 (ATMIN-001) 81035847-81047358 protein_coding
ENST00000539819 (ATMIN-002) 81037182-81045174 processed_transcript
ENST00000562969 (ATMIN-006) 81036058-81041711 retained_intron
ENST00000564241 (ATMIN-003) 81037187-81047348 protein_coding
ENST00000565237 (ATMIN-005) 81037208-81042450 protein_coding
ENST00000566488 (ATMIN-004) 81040525-81047346 protein_coding
ENSG00000166455 (C16orf46)
chromosome 16 open reading frame 46 		ENST00000299578 (C16orf46-001) 81060980-81077244 protein_coding
ENST00000378611 (C16orf46-002) 81053497-81077213 protein_coding
ENST00000444657 (C16orf46-004) 81061710-81077267 processed_transcript
ENST00000565253 (C16orf46-005) 81063754-81077078 protein_coding
ENSG00000260643 (RP11-303E16.8)
 ENST00000564536 (RP11-303E16.8-001) 81053665-81087651 processed_transcript
ENSG00000261141 (RP11-303E16.5)
 ENST00000562450 (RP11-303E16.5-001) 81055301-81056426 antisense
ENSG00000261838 (RP11-303E16.6)
 ENST00000563072 (RP11-303E16.6-002) 81071998-81076598 antisense
ENST00000568362 (RP11-303E16.6-001) 81069854-81076598 antisense
CIL_0001QN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047388-ENSMUSG00000031847 CGP 10090 8:116943393-116978943
GeneTranscriptPositionBiotype
ENSMUSG00000031847 (1700030J22Rik)
RIKEN cDNA 1700030J22 gene 		ENSMUST00000070577 (1700030J22Rik-201) 116969599-116978943 protein_coding
ENSMUSG00000047388 (Atmin)
ATM interactor 		ENSMUST00000109099 (Atmin-001) 116943393-116960445 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QN_0001ENSG00000166454ENST00000299575ENST00000539819ENST00000562969ENST00000564241ENST00000565237ENST00000566488ENSG00000166455ENST00000299578ENST00000378611ENST00000444657ENST00000565253ENSG00000260643ENST00000564536ENSG00000261141ENST00000562450ENSG00000261838ENST00000563072ENST00000568362CIL_0001QN_0002ENSMUSG00000031847ENSMUST00000070577ENSMUSG00000047388ENSMUST00000109099
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QN_0001ENSG00000166454ENST00000299575ENST00000539819ENST00000564241ENST00000566488ENSG00000166455ENST00000299578ENST00000378611ENST00000565253ENSG00000260643ENST00000564536ENSG00000261141ENST00000562450ENSG00000261838ENST00000563072ENST00000568362CIL_0001QN_0002ENSMUSG00000031847ENSMUST00000070577ENSMUSG00000047388ENSMUST00000109099
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166454 ENST00000299575 8.695±0.00 5.709±0.00 1.610±0.00 11.168±0.13 4.277±2.27 3.699±0.01 4.145±1.16 4.198±1.68 4.592±1.25 2.092±0.37 3.794±0.03 4.748±1.87 11.088±5.04 11.477±0.56
ENST00000539819 N/A N/A 1.068±0.00 N/A N/A 0.984±0.00 N/A N/A N/A 1.179±0.00 1.795±0.73 2.711±1.47 9.079±0.89 16.865±9.59
ENST00000562969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564241 N/A N/A N/A N/A 1.978±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566488 N/A 1.275±0.00 0.559±0.00 1.440±0.00 0.653±0.16 0.411±0.00 N/A 0.859±0.00 N/A 0.963±0.00 N/A 0.516±0.17 N/A N/A
ENSG00000166455 ENST00000299578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.932±0.00
ENST00000378611 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.909±0.00 N/A N/A N/A 2.820±0.07
ENST00000444657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565253 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.173±0.00 N/A N/A N/A N/A
ENSG00000260643 ENST00000564536 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.138±0.00 N/A N/A N/A 7.004±0.00
ENSG00000261141 ENST00000562450 0.121±0.00 0.118±0.00 0.452±0.00 0.371±0.30 0.166±0.08 0.267±0.00 0.019±0.00 0.349±0.00 0.153±0.00 0.385±0.00 N/A 0.280±0.29 0.115±0.00 0.285±0.00
ENSG00000261838 ENST00000563072 N/A N/A N/A 0.039±0.00 N/A N/A N/A 0.144±0.00 N/A 0.113±0.00 N/A 0.126±0.03 3.352±1.15 0.133±0.00
ENST00000568362 N/A N/A N/A N/A 0.073±0.00 N/A N/A 0.071±0.00 0.233±0.00 N/A N/A 0.937±0.00 1.185±0.00 5.912±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031847 ENSMUST00000070577 0.269±0.11 0.196±0.10 0.220±0.00 1.205±0.22 0.150±0.04 0.317±0.08 0.140±0.05 0.420±0.20 0.144±0.07 0.795±0.07 0.041±0.01 0.843±0.17 0.982±0.53 60.940±14.87
ENSMUSG00000047388 ENSMUST00000109099 7.394±1.57 6.848±0.91 5.313±0.07 8.622±0.73 8.041±1.31 8.243±0.96 4.043±0.36 7.627±0.59 2.069±0.37 8.377±0.26 6.464±0.32 10.969±2.97 11.713±4.14 14.756±6.24

Loading