C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: galanin receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000299727 GALR1-001 ENSG00000166573 9606 + 18:77250549-77277896 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299727
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299727 0.114±0.00 0.048±0.00 0.029±0.00 0.204±0.09 0.080±0.00 0.098±0.00 0.014±0.01 0.016±0.01 0.022±0.02 0.031±0.00 0.001±0.00 0.010±0.01 0.003±0.00 0.078±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000018 CIL_000018_0002 CGP 18:77250549-79002677

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0004966 IDA galanin receptor activity
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007189 IEA adenylate cyclase-activating G-protein coupled receptor signaling pathway
GO:0007194 IEA negative regulation of adenylate cyclase activity
GO:0007204 IEA positive regulation of cytosolic calcium ion concentration
GO:0007218 TAS neuropeptide signaling pathway
GO:0007586 TAS digestion
GO:0016021 IEA integral component of membrane
GO:0017046 IDA peptide hormone binding
GO:0042923 IEA neuropeptide binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0051464 IMP positive regulation of cortisol secretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065224 Galr1-201 protein_coding Mus_musculus 0 1210
ENSMUST00000179332 5730455P16Rik-201 protein_coding Mus_musculus 0.00001 58
ENSMUST00000103225 5730455P16Rik-001 protein_coding Mus_musculus 0.00001 58
ENSMUST00000135399 Usp16-007 retained_intron Mus_musculus 0.0007 53

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