C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00060R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000044091-ENSDARG00000061120 CGP 7955 10:24754947-24822912
GeneTranscriptPositionBiotype
ENSDARG00000061120 (slc43a2b)
solute carrier family 43, member 2b 		ENSDART00000048532 (slc43a2b-201) 24804084-24822150 protein_coding
ENSDART00000100772 (slc43a2b-202) 24805698-24822912 protein_coding
ENSDART00000137749 (slc43a2b-002) 24808613-24810972 processed_transcript
ENSDART00000141332 (slc43a2b-001) 24803925-24822912 protein_coding
ENSDARG00000085954 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000121354 (5S_rRNA.1440-201) 24784946-24785062 rRNA

Danio rerio Ensembl (Zv9)

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CIL_00060R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000174238-ENSG00000167703 CGP 9606 17:1517718-1628886
GeneTranscriptPositionBiotype
ENSG00000167703 (SLC43A2)
solute carrier family 43 (amino acid system L transporter), member 2 		ENST00000301335 (SLC43A2-001) 1569267-1628836 protein_coding
ENST00000412517 (SLC43A2-005) 1575501-1605085 protein_coding
ENST00000571376 (SLC43A2-012) 1591622-1627911 nonsense_mediated_decay
ENST00000571650 (SLC43A2-004) 1574372-1628341 protein_coding
ENST00000572135 (SLC43A2-003) 1585239-1628250 retained_intron
ENST00000572801 (SLC43A2-011) 1590850-1628840 nonsense_mediated_decay
ENST00000574274 (SLC43A2-007) 1590907-1605276 processed_transcript
ENST00000574743 (SLC43A2-002) 1585239-1628886 retained_intron
ENST00000575944 (SLC43A2-006) 1616366-1627799 retained_intron
ENST00000576537 (SLC43A2-010) 1576603-1578705 retained_intron
ENST00000576721 (SLC43A2-008) 1591440-1604944 nonsense_mediated_decay
ENST00000576769 (SLC43A2-009) 1578254-1583698 retained_intron
ENSG00000174238 (PITPNA)
phosphatidylinositol transfer protein, alpha 		ENST00000313486 (PITPNA-001) 1517718-1562816 protein_coding
ENST00000539476 (PITPNA-201) 1517993-1562791 protein_coding
ENST00000572004 (PITPNA-002) 1538439-1541599 retained_intron
ENST00000573056 (PITPNA-004) 1543020-1559801 protein_coding
ENST00000573231 (PITPNA-006) 1541587-1562630 protein_coding
ENST00000574991 (PITPNA-003) 1534169-1553072 protein_coding
ENST00000575288 (PITPNA-010) 1520213-1562746 nonsense_mediated_decay
ENST00000575895 (PITPNA-005) 1535262-1559801 protein_coding
ENST00000576010 (PITPNA-009) 1535507-1562780 protein_coding
ENST00000576722 (PITPNA-008) 1535182-1562739 protein_coding
ENST00000576761 (PITPNA-007) 1535471-1562768 protein_coding
ENSG00000243704 (RN7SL105P)
RNA, 7SL, cytoplasmic 105, pseudogene 		ENST00000475661 (RN7SL105P-201) 1604374-1604672 misc_RNA

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00060R_0001ENSDARG00000061120ENSDART00000048532ENSDART00000100772ENSDART00000137749ENSDART00000141332ENSDARG00000085954ENSDART00000121354CIL_00060R_0002ENSG00000167703ENST00000301335ENST00000412517ENST00000571376ENST00000571650ENST00000572135ENST00000572801ENST00000574274ENST00000574743ENST00000575944ENST00000576537ENST00000576721ENST00000576769ENSG00000174238ENST00000313486ENST00000539476ENST00000572004ENST00000573056ENST00000573231ENST00000574991ENST00000575288ENST00000575895ENST00000576010ENST00000576722ENST00000576761ENSG00000243704ENST00000475661
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00060R_0001ENSDARG00000061120ENSDART00000048532ENSDART00000100772ENSDART00000141332ENSDARG00000085954ENSDART00000121354CIL_00060R_0002ENSG00000167703ENST00000301335ENST00000412517ENST00000571650ENST00000572801ENST00000574274ENST00000574743ENSG00000174238ENST00000313486ENST00000539476ENST00000574991ENST00000575288ENST00000575895ENSG00000243704ENST00000475661
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000061120 ENSDART00000048532 N/A N/A N/A 0.702±0.24 N/A N/A 0.796±0.44 15.714±3.20 0.136±0.00 N/A 1.805±0.00 N/A N/A N/A
ENSDART00000100772 N/A N/A N/A 0.900±0.38 N/A N/A 0.999±0.00 20.729±0.00 0.279±0.00 N/A 1.545±0.00 N/A N/A N/A
ENSDART00000137749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141332 N/A N/A N/A 0.647±0.39 N/A N/A 0.810±0.53 5.326±0.23 N/A N/A 2.126±0.00 N/A N/A N/A
ENSDARG00000085954 ENSDART00000121354 N/A N/A N/A 88.478±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167703 ENST00000301335 N/A 1.702±0.00 0.722±0.00 1.308±0.00 0.628±0.35 0.702±0.00 0.071±0.00 7.294±0.00 0.301±0.00 0.651±0.37 5.694±0.00 0.167±0.00 7.419±1.80 N/A
ENST00000412517 N/A N/A 4.897±0.00 1.111±0.00 5.315±0.00 1.138±0.00 0.621±0.00 0.257±0.00 1.304±0.00 N/A 0.860±0.00 2.839±0.96 69.980±0.00 N/A
ENST00000571376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571650 11.099±0.00 7.556±0.00 N/A 2.566±1.51 8.327±0.00 5.707±0.00 0.518±0.34 14.548±0.00 0.844±0.00 10.508±0.00 6.346±6.19 5.649±0.50 121.476±46.80 2.859±1.53
ENST00000572135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.412±0.00
ENST00000574274 N/A N/A N/A N/A N/A N/A 0.523±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000574743 N/A N/A N/A N/A N/A N/A N/A 0.437±0.00 0.589±0.00 N/A N/A N/A N/A N/A
ENST00000575944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000174238 ENST00000313486 4.580±0.00 N/A N/A 4.858±1.66 8.629±0.00 8.083±4.42 3.035±2.34 9.831±0.00 3.946±0.75 2.363±0.79 2.655±2.30 5.584±4.95 5.063±0.25 23.406±0.00
ENST00000539476 6.711±0.00 7.449±0.00 N/A 25.169±0.00 N/A N/A 5.323±0.00 7.142±5.65 4.423±0.00 12.554±0.00 N/A 11.908±0.00 N/A N/A
ENST00000572004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.367±0.00 28.759±0.00 42.296±0.00
ENST00000575288 11.300±0.00 10.489±0.00 N/A 20.496±0.00 11.352±0.00 9.162±6.38 6.206±0.00 N/A 4.793±0.00 18.260±0.00 4.015±0.00 9.544±7.21 31.485±0.00 28.661±9.37
ENST00000575895 N/A N/A N/A N/A N/A N/A 1.335±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000576010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000243704 ENST00000475661 N/A 0.068±0.00 0.609±0.00 N/A N/A N/A 0.131±0.00 0.283±0.00 N/A N/A 0.623±0.00 0.170±0.00 0.295±0.03 N/A

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