C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin alpha FG-GAP repeat containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000301678 ITFG3-003 ENSG00000167930 9606 + 16:234846-266120 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000301678
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000301678 34.094±0.00 19.018±0.00 0.843±0.00 17.227±0.00 28.388±27.04 12.692±11.35 12.360±11.45 9.283±8.65 6.446±5.29 10.259±0.00 63.328±0.00 19.148±5.63 29.466±6.34 31.012±5.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0001 VISTA 16:-195470-405616
CIL_0008HK CIL_0008HK_0001 VISTA 16:-187027-414801

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0009986 IDA cell surface
GO:0016021 IEA integral component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118487 Itfg3-002 protein_coding Mus_musculus 0 1013
ENSMUST00000114988 Itfg3-001 protein_coding Mus_musculus 0 1013

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