C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin alpha FG-GAP repeat containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114988 Itfg3-001 ENSMUSG00000024187 10090 - 17:26211822-26244223 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114988
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114988 5.307±1.09 8.568±3.05 3.517±0.11 1.363±0.00 4.501±1.31 19.099±1.85 3.805±0.53 4.350±0.81 2.728±1.15 4.467±0.91 1.455±0.17 7.163±1.86 8.587±7.34 2.716±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KN CIL_0008KN_0002 VISTA 17:26208852-26810691
CIL_0002RY CIL_0002RY_0002 CGP 17:26211822-26285504

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301678 ITFG3-003 protein_coding Homo_sapiens 0 1013
ENST00000301679 ITFG3-002 protein_coding Homo_sapiens 0 941
ENST00000399932 ITFG3-001 protein_coding Homo_sapiens 0 1026
ENST00000600536 ITFG3-001 protein_coding Homo_sapiens 0 863

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