C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin alpha FG-GAP repeat containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118487 Itfg3-002 ENSMUSG00000024187 10090 - 17:26212713-26244141 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118487
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118487 31.367±17.80 28.877±14.76 31.714±4.62 7.567±2.92 16.116±5.27 73.311±7.58 17.509±1.81 30.569±4.02 8.240±4.24 11.494±2.54 10.758±1.84 27.470±10.18 24.891±27.17 14.784±6.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KN CIL_0008KN_0002 VISTA 17:26208852-26810691
CIL_0002RY CIL_0002RY_0002 CGP 17:26211822-26285504

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301678 ITFG3-003 protein_coding Homo_sapiens 0 1013
ENST00000301679 ITFG3-002 protein_coding Homo_sapiens 0 931
ENST00000399932 ITFG3-001 protein_coding Homo_sapiens 0 1016
ENST00000600536 ITFG3-001 protein_coding Homo_sapiens 0 854

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