C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000303436 ARF4-001 ENSG00000168374 9606 - 3:57571363-57597408 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000303436
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000303436 22.289±0.00 34.522±0.00 4.995±0.00 20.602±7.62 38.172±15.79 28.795±7.23 14.801±10.63 37.034±24.26 30.870±17.22 45.288±31.01 5.793±4.09 47.549±32.95 96.446±52.47 35.824±16.18

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0004871 IEA signal transducer activity
GO:0005154 IDA epidermal growth factor receptor binding
GO:0005515 IPI protein binding
GO:0005525 IEA:IDA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005829 IDA cytosol
GO:0005886 IEA plasma membrane
GO:0006471 IDA protein ADP-ribosylation
GO:0006886 IEA intracellular protein transport
GO:0007173 IEA epidermal growth factor receptor signaling pathway
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007264 IEA small GTPase mediated signal transduction
GO:0007420 IEA brain development
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0016477 IDA cell migration
GO:0019001 IEA guanyl nucleotide binding
GO:0031584 IDA activation of phospholipase D activity
GO:0031683 IEA G-protein beta/gamma-subunit complex binding
GO:0032587 IDA ruffle membrane
GO:0043066 IDA negative regulation of apoptotic process
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048678 IEA response to axon injury
GO:0070062 IDA extracellular vesicular exosome
GO:2000377 IDA regulation of reactive oxygen species metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022429 Arf4-001 protein_coding Mus_musculus 0 1585
ENSMUST00000112318 Arf4-002 protein_coding Mus_musculus 0 1315
ENSMUST00000166075 Arf4-003 nonsense_mediated_decay Mus_musculus 0 1291
ENSMUST00000171282 Arf4-004 processed_transcript Mus_musculus 0 1112

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