C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000303665 ARHGAP17-002 ENSG00000140750 9606 - 16:24919393-25015331 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLungMuscleOvaryPlacentaENST00000303665
Transcript ID Adipose Adrenal Brain Breast Colon Heart Lung Muscle Ovary Placenta
ENST00000303665 5.918±0.00 10.281±0.00 3.534±0.00 4.913±3.66 2.541±0.71 7.446±0.00 8.675±0.00 8.003±0.00 4.752±1.99 5.329±1.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KU CIL_0005KU_0001 CGP 16:24845841-25015666
CIL_0003XC CIL_0003XC_0001 CGP 16:24919385-25178231

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005515 IPI:IEA protein binding
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005923 IEA tight junction
GO:0007165 IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0017124 IEA SH3 domain binding
GO:0043547 IEA positive regulation of GTPase activity
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098060 Arhgap17-201 protein_coding Mus_musculus 0 1973
ENSMUST00000106442 Arhgap17-202 protein_coding Mus_musculus 0 1838
ENSMUST00000167309 Arhgap17-203 protein_coding Mus_musculus 0 1838

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