C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00042N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000004692-ENSDARG00000027611 CGP 7955 9:25248005-25275937
GeneTranscriptPositionBiotype
ENSDARG00000004692 (nabp1a)
nucleic acid binding protein 1a
ENSDART00000007914 (nabp1a-002) 25248005-25251404 protein_coding
ENSDART00000135356 (nabp1a-001) 25248005-25251712 protein_coding
ENSDART00000147286 (nabp1a-003) 25248941-25251270 retained_intron
ENSDARG00000027611 (sdpra)
serum deprivation response a
ENSDART00000039399 (sdpra-001) 25256413-25275937 protein_coding
CIL_00042N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173559-ENSG00000168497 CGP 9606 2:191678068-191847255
GeneTranscriptPositionBiotype
ENSG00000168497 (SDPR)
serum deprivation response
ENST00000304141 (SDPR-001) 191834302-191847255 protein_coding
ENSG00000173559 (NABP1)
nucleic acid binding protein 1
ENST00000307834 (NABP1-003) 191678127-191686939 nonsense_mediated_decay
ENST00000307849 (NABP1-002) 191678136-191687572 nonsense_mediated_decay
ENST00000409510 (NABP1-010) 191678204-191685894 protein_coding
ENST00000410026 (NABP1-004) 191678136-191696659 protein_coding
ENST00000425611 (NABP1-001) 191678532-191686948 protein_coding
ENST00000435931 (NABP1-007) 191678990-191686177 protein_coding
ENST00000451500 (NABP1-006) 191678147-191686157 nonsense_mediated_decay
ENST00000462712 (NABP1-008) 191678136-191683135 retained_intron
ENST00000462824 (NABP1-009) 191683505-191685076 retained_intron
ENST00000491331 (NABP1-005) 191678068-191682487 retained_intron
ENSG00000225884 (AC098872.3)
ENST00000413304 (AC098872.3-001) 191793425-191820250 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00042N_0001ENSDARG00000004692ENSDART00000007914ENSDART00000135356ENSDART00000147286ENSDARG00000027611ENSDART00000039399CIL_00042N_0002ENSG00000168497ENST00000304141ENSG00000173559ENST00000307834ENST00000307849ENST00000409510ENST00000410026ENST00000425611ENST00000435931ENST00000451500ENST00000462712ENST00000462824ENST00000491331ENSG00000225884ENST00000413304
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00042N_0001ENSDARG00000004692ENSDART00000007914ENSDART00000135356ENSDART00000147286ENSDARG00000027611ENSDART00000039399CIL_00042N_0002ENSG00000168497ENST00000304141ENSG00000173559ENST00000307834ENST00000307849ENST00000409510ENST00000410026ENST00000425611ENST00000451500ENST00000462712ENSG00000225884ENST00000413304
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004692 ENSDART00000007914 N/A N/A N/A N/A N/A N/A 3.206±1.33 6.808±0.00 2.071±0.00 N/A 3.969±0.00 N/A N/A N/A
ENSDART00000135356 N/A N/A N/A 4.883±1.56 N/A N/A N/A 2.620±0.00 0.993±0.00 N/A 5.157±0.00 N/A N/A N/A
ENSDART00000147286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.365±0.00 N/A N/A N/A
ENSDARG00000027611 ENSDART00000039399 N/A N/A N/A 1.678±0.42 N/A N/A 4.650±2.92 1.540±1.61 1.114±0.00 N/A 1.655±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000168497 ENST00000304141 54.232±0.00 38.601±0.00 2.345±0.00 2.135±0.39 26.733±17.34 25.706±18.75 16.473±4.20 15.241±10.74 17.095±8.11 37.413±1.85 3.680±1.27 7.483±4.37 11.317±4.12 7.611±4.67
ENSG00000173559 ENST00000307834 2.052±0.00 N/A N/A N/A 4.719±0.00 N/A N/A 2.604±0.00 N/A 6.560±0.00 N/A 2.241±0.00 1.093±0.00 2.499±0.00
ENST00000307849 N/A N/A N/A N/A 2.963±0.00 1.191±0.00 N/A 0.708±0.00 N/A 2.545±0.00 0.130±0.00 1.884±1.35 N/A 4.289±0.00
ENST00000409510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.409±0.00 21.283±0.00 6.561±0.00 21.918±0.00
ENST00000410026 0.884±0.00 N/A 0.546±0.00 0.107±0.00 1.057±0.00 0.133±0.00 0.167±0.00 N/A 0.231±0.00 0.865±0.00 0.049±0.00 1.075±0.63 0.267±0.04 1.276±0.93
ENST00000425611 2.560±0.00 4.761±0.00 N/A 0.581±0.13 N/A 2.266±0.00 0.444±0.00 1.941±0.00 1.540±0.00 4.336±0.00 0.655±0.00 5.694±5.09 3.117±0.25 3.155±0.00
ENST00000435931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451500 N/A N/A N/A 0.308±0.00 N/A N/A N/A 1.188±0.00 1.244±0.55 N/A N/A N/A N/A N/A
ENST00000462712 N/A N/A 3.435±0.00 0.608±0.00 7.274±0.00 3.271±0.00 N/A 2.723±0.00 4.845±0.00 9.053±0.00 0.674±0.00 7.071±0.00 N/A N/A
ENST00000462824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225884 ENST00000413304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.922±0.69

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