C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin M4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153128 Cnnm4-001 ENSMUSG00000037408 10090 + 1:36471620-36508764 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000153128
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000153128 1.848±0.60 1.293±0.24 3.280±0.16 1.028±0.58 2.659±0.30 105.949±12.48 1.294±0.16 6.489±0.58 0.931±0.25 2.669±0.45 0.760±0.31 3.439±1.20 1.788±0.82 5.862±2.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OA CIL_0003OA_0002 CGP 1:36422065-36508764
CIL_0003O9 CIL_0003O9_0002 CGP 1:36471620-36528237

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0006811 IEA ion transport
GO:0007601 IEA visual perception
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0030554 IEA adenyl nucleotide binding
GO:0031214 IEA biomineral tissue development
GO:0050896 IEA response to stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000114069 cnnm4-201 protein_coding Danio_rerio 0 749
ENSDART00000132406 cnnm4-001 protein_coding Danio_rerio 0 715
ENSDART00000112646 cnnm1-001 protein_coding Danio_rerio 0 370
ENST00000305510 CNNM3-001 protein_coding Homo_sapiens 0 298
ENST00000369875 CNNM2-004 protein_coding Homo_sapiens 0 501
ENST00000369878 CNNM2-001 protein_coding Homo_sapiens 0 658
ENST00000377075 CNNM4-001 protein_coding Homo_sapiens 0 2734
ENST00000433628 CNNM2-002 protein_coding Homo_sapiens 0 658
ENST00000482716 CNNM4-002 processed_transcript Homo_sapiens 0 309
ENST00000493384 CNNM4-004 processed_transcript Homo_sapiens 0 477
ENST00000496186 CNNM4-003 processed_transcript Homo_sapiens 0 717

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