C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB33B, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000305626 RAB33B-001 ENSG00000172007 9606 + 4:139453807-139476609 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverLungOvaryPlacentaENST00000305626
Transcript ID Adrenal Brain Breast Colon Heart Liver Lung Ovary Placenta
ENST00000305626 2.213±0.00 2.620±0.13 3.410±0.00 2.478±0.00 1.734±0.00 2.352±0.00 3.022±0.00 3.040±0.00 1.783±0.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KM CIL_0005KM_0001 CGP 4:139301455-139476609
CIL_0004PE CIL_0004PE_0001 CGP 4:139453232-139606699

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IMP:IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005796 IDA Golgi lumen
GO:0006184 IMP:IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0006914 IEA autophagy
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0070062 IDA extracellular vesicular exosome
GO:1903434 IMP negative regulation of constitutive secretory pathway
GO:2000156 IMP regulation of retrograde vesicle-mediated transport, Golgi to ER
GO:2000785 ISS regulation of autophagic vacuole assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054387 Rab33b-001 protein_coding Mus_musculus 0 822

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