C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: breakpoint cluster region
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000305877 BCR-001 ENSG00000186716 9606 + 22:23180210-23318037 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartLiverLungOvaryPlacentaTestisENST00000305877
Transcript ID Adipose Brain Colon Heart Liver Lung Ovary Placenta Testis
ENST00000305877 2.648±0.00 4.262±0.49 1.713±0.00 0.689±0.40 1.564±0.00 2.011±0.00 2.739±1.22 2.504±0.00 8.862±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002X0 CIL_0002X0_0001 CGP 22:23145326-23318037

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004713 TAS protein tyrosine kinase activity
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005096 TAS:IEA GTPase activator activity
GO:0005515 IPI:IEA protein binding
GO:0005524 IEA ATP binding
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005886 IEA plasma membrane
GO:0006468 TAS:IEA protein phosphorylation
GO:0007165 TAS:IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0007420 IEA brain development
GO:0016020 IDA membrane
GO:0016301 TAS kinase activity
GO:0018108 TAS peptidyl-tyrosine phosphorylation
GO:0019899 IEA enzyme binding
GO:0030036 IEA actin cytoskeleton organization
GO:0030336 IEA negative regulation of cell migration
GO:0030675 IEA Rac GTPase activator activity
GO:0032496 IEA response to lipopolysaccharide
GO:0032855 IEA positive regulation of Rac GTPase activity
GO:0035023 IEA regulation of Rho protein signal transduction
GO:0042472 IEA inner ear morphogenesis
GO:0043234 IDA protein complex
GO:0043314 IEA negative regulation of neutrophil degranulation
GO:0046777 IEA protein autophosphorylation
GO:0048008 IEA platelet-derived growth factor receptor signaling pathway
GO:0050728 IEA negative regulation of inflammatory response
GO:0050766 IEA positive regulation of phagocytosis
GO:0050885 IEA neuromuscular process controlling balance
GO:0051056 TAS regulation of small GTPase mediated signal transduction
GO:0051726 IEA regulation of cell cycle
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164107 Bcr-201 protein_coding Mus_musculus 0 4911
ENSDART00000101282 bcr-001 protein_coding Danio_rerio 0 1404

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