C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuronal pentraxin I
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000306773 NPTX1-001 ENSG00000171246 9606 - 17:80467148-80476604 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306773
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306773 0.158±0.00 0.025±0.00 8.629±1.79 0.111±0.10 1.668±1.15 0.029±0.00 0.471±0.00 0.159±0.00 0.129±0.00 0.133±0.11 0.675±0.33 1.152±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042I CIL_00042I_0001 CGP 17:80415165-80477843
CIL_00042J CIL_00042J_0001 CGP 17:80467148-80966371

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005886 IEA plasma membrane
GO:0006810 TAS transport
GO:0006839 IEA mitochondrial transport
GO:0007268 TAS synaptic transmission
GO:0007417 TAS central nervous system development
GO:0031410 IEA cytoplasmic vesicle
GO:0035865 IEA cellular response to potassium ion
GO:0043005 IEA neuron projection
GO:0043653 IEA mitochondrial fragmentation involved in apoptotic process
GO:0046872 IEA metal ion binding
GO:0060385 IEA axonogenesis involved in innervation
GO:0071333 IEA cellular response to glucose stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026670 Nptx1-001 protein_coding Mus_musculus 0 1951
ENSDART00000055071 nptx2a-201 protein_coding Danio_rerio 0 220
ENSDART00000154132 nptx2a-001 protein_coding Danio_rerio 0 220

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