C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NOP2/Sun domain family, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000307089 NSUN4-003 ENSG00000117481 9606 + 1:46340789-46365152 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000307089
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000307089 1.650±0.00 4.128±0.00 1.209±0.00 1.695±0.08 2.427±0.00 1.394±1.08 1.178±0.00 1.707±0.58 1.445±0.13 0.818±0.00 1.374±0.61 1.836±1.28 2.554±1.01 2.626±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030474 Nsun4-002 nonsense_mediated_decay Mus_musculus 0 743
ENSMUST00000165493 Nsun4-006 protein_coding Mus_musculus 0 739
ENSMUST00000030475 Nsun4-001 protein_coding Mus_musculus 0 739
ENSMUST00000151720 Nsun4-003 processed_transcript Mus_musculus 0 239
ENSMUST00000136655 Nsun4-004 processed_transcript Mus_musculus 7.00649e-45 187
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000000000000008 88
ENSMUST00000125797 Atp13a2-003 retained_intron Mus_musculus 0.00000001 68

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