Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	prolyl 4-hydroxylase, alpha polypeptide I
ENST00000307116	P4HA1-001	ENSG00000122884	9606	-	10:73007217-73096850	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000307116	5.909±0.00	3.396±0.00	3.982±0.00	3.801±0.00	6.975±0.00	5.568±4.04	4.643±0.00	4.922±3.31	3.747±0.00	19.672±0.00	11.101±4.20	11.599±4.39	6.896±1.70

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0008QA	CIL_0008QA_0001	VISTA	10:72591086-73192639

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0004656	IEA	procollagen-proline 4-dioxygenase activity
GO:0005506	IEA	iron ion binding
GO:0005515	IPI:IEA	protein binding
GO:0005739	IDA	mitochondrion
GO:0005783	IDA:IEA	endoplasmic reticulum
GO:0016020	IDA	membrane
GO:0016491	IEA	oxidoreductase activity
GO:0016702	IEA	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0016705	IEA	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016706	IEA	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0031418	IEA	L-ascorbic acid binding
GO:0043231	IDA	intracellular membrane-bounded organelle
GO:0055114	IEA	oxidation-reduction process

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000009789	P4ha1-001	protein_coding	Mus_musculus	0	2074
ENSMUST00000105466	P4ha1-002	protein_coding	Mus_musculus	0	1941
ENSMUST00000092512	P4ha1-003	protein_coding	Mus_musculus	0	1105

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