C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prolyl 4-hydroxylase, alpha polypeptide I
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000307116 P4HA1-001 ENSG00000122884 9606 - 10:73007217-73096850 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000307116
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000307116 5.909±0.00 3.396±0.00 3.982±0.00 3.801±0.00 6.975±0.00 5.568±4.04 4.643±0.00 4.922±3.31 3.747±0.00 19.672±0.00 11.101±4.20 11.599±4.39 6.896±1.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QA CIL_0008QA_0001 VISTA 10:72591086-73192639

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004656 IEA procollagen-proline 4-dioxygenase activity
GO:0005506 IEA iron ion binding
GO:0005515 IPI:IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005783 IDA:IEA endoplasmic reticulum
GO:0016020 IDA membrane
GO:0016491 IEA oxidoreductase activity
GO:0016702 IEA oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016706 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0031418 IEA L-ascorbic acid binding
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000009789 P4ha1-001 protein_coding Mus_musculus 0 2074
ENSMUST00000105466 P4ha1-002 protein_coding Mus_musculus 0 1941
ENSMUST00000092512 P4ha1-003 protein_coding Mus_musculus 0 1105

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