C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pantothenate kinase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184105 Pank2-003 ENSMUSG00000037514 10090 + 2:131262525-131296488 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLiverLungOvaryPlacentaTestisENSMUST00000184105
Transcript ID Adrenal Brain Breast Colon Liver Lung Ovary Placenta Testis
ENSMUST00000184105 5.312±0.54 11.281±0.00 6.870±0.12 6.714±0.00 2.159±0.00 7.350±0.00 6.656±0.00 9.144±2.61 15.874±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00067O CIL_00067O_0003 CGP 2:131234063-131299188
CIL_0004LL CIL_0004LL_0002 CGP 2:131262495-131352892

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004594 IGI pantothenate kinase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005829 IDA cytosol
GO:0007286 IMP spermatid development
GO:0009060 IMP aerobic respiration
GO:0015937 IMP coenzyme A biosynthetic process
GO:0016310 IEA phosphorylation
GO:0051881 IMP regulation of mitochondrial membrane potential
GO:0070584 IMP mitochondrion morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307534 PANK1-201 protein_coding Homo_sapiens 0 309
ENST00000316562 PANK2-007 protein_coding Homo_sapiens 0 1077
ENST00000322191 PANK1-002 protein_coding Homo_sapiens 9e-37 159
ENST00000336066 PANK2-002 nonsense_mediated_decay Homo_sapiens 0 1537
ENST00000342512 PANK1-001 protein_coding Homo_sapiens 0 309
ENST00000464452 PANK2-005 processed_transcript Homo_sapiens 0 821
ENST00000471830 PANK2-004 processed_transcript Homo_sapiens 0 658
ENST00000495692 PANK2-003 protein_coding Homo_sapiens 0 1240
ENST00000497424 PANK2-001 protein_coding Homo_sapiens 0 1077
ENST00000610179 PANK2-008 protein_coding Homo_sapiens 0 1077
ENST00000621507 PANK2-201 protein_coding Homo_sapiens 0 1077

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