C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pantothenate kinase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184932 Pank2-004 ENSMUSG00000037514 10090 + 2:131262568-131299186 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSMUST00000184932
Transcript ID Muscle
ENSMUST00000184932 1.483±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00067O CIL_00067O_0003 CGP 2:131234063-131299188
CIL_0004LL CIL_0004LL_0002 CGP 2:131262495-131352892

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004594 IGI pantothenate kinase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005829 IDA cytosol
GO:0007286 IMP spermatid development
GO:0009060 IMP aerobic respiration
GO:0015937 IMP coenzyme A biosynthetic process
GO:0016310 IEA phosphorylation
GO:0051881 IMP regulation of mitochondrial membrane potential
GO:0070584 IMP mitochondrion morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307534 PANK1-201 protein_coding Homo_sapiens 7e-37 161
ENST00000316562 PANK2-007 protein_coding Homo_sapiens 0 442
ENST00000322191 PANK1-002 protein_coding Homo_sapiens 9e-37 159
ENST00000336066 PANK2-002 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000342512 PANK1-001 protein_coding Homo_sapiens 3e-37 161
ENST00000464452 PANK2-005 processed_transcript Homo_sapiens 5.60519e-45 185
ENST00000471830 PANK2-004 processed_transcript Homo_sapiens 0 294
ENST00000495692 PANK2-003 protein_coding Homo_sapiens 0 311
ENST00000497424 PANK2-001 protein_coding Homo_sapiens 0 442
ENST00000610179 PANK2-008 protein_coding Homo_sapiens 0 442
ENST00000621507 PANK2-201 protein_coding Homo_sapiens 0 442

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