C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, catalytic subunit, alpha isoform
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046094 Ppp1ca-201 ENSMUSG00000040385 10090 + 19:4192158-4195419 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046094
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046094 188.229±10.59 230.934±22.39 114.676±12.62 137.053±13.00 199.984±22.56 172.963±12.49 140.222±8.07 175.976±6.21 169.894±31.37 160.615±8.43 86.074±10.78 194.668±21.20 178.172±35.69 18.135±5.65

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000164 IEA protein phosphatase type 1 complex
GO:0004721 IDA phosphoprotein phosphatase activity
GO:0004722 IDA protein serine/threonine phosphatase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0005737 IDA cytoplasm
GO:0005977 TAS glycogen metabolic process
GO:0005979 IEA regulation of glycogen biosynthetic process
GO:0005981 IEA regulation of glycogen catabolic process
GO:0006417 TAS regulation of translation
GO:0006470 IDA protein dephosphorylation
GO:0007143 TAS female meiotic division
GO:0009987 TAS cellular process
GO:0016791 IDA phosphatase activity
GO:0030324 IMP lung development
GO:0032922 IDA circadian regulation of gene expression
GO:0042587 IEA glycogen granule
GO:0042752 IMP regulation of circadian rhythm
GO:0043005 IEA neuron projection
GO:0043021 IEA ribonucleoprotein complex binding
GO:0043025 IEA neuronal cell body
GO:0043153 IMP entrainment of circadian clock by photoperiod
GO:0043197 IEA dendritic spine
GO:0043204 IEA perikaryon
GO:0046872 IEA metal ion binding
GO:0048754 IMP branching morphogenesis of an epithelial tube
GO:0070062 IEA extracellular vesicular exosome
GO:0070688 IEA MLL5-L complex
GO:0072357 ISS PTW/PP1 phosphatase complex
GO:2001241 IMP positive regulation of extrinsic apoptotic signaling pathway in absence of ligand

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296122 PPP1CB-003 protein_coding Homo_sapiens 0 496
ENST00000307980 RAD9A-001 protein_coding Homo_sapiens 0 211
ENST00000312989 PPP1CA-002 protein_coding Homo_sapiens 0 1404
ENST00000358239 PPP1CA-006 protein_coding Homo_sapiens 0 1018
ENST00000358506 PPP1CB-201 protein_coding Homo_sapiens 0 496
ENST00000376745 PPP1CA-001 protein_coding Homo_sapiens 0 1544
ENST00000395366 PPP1CB-001 protein_coding Homo_sapiens 0 496
ENST00000418910 PPP1CB-009 protein_coding Homo_sapiens 4e-36 154
ENST00000455580 PPP1CB-004 protein_coding Homo_sapiens 0 318
ENST00000526510 PPP1CA-003 retained_intron Homo_sapiens 0 1371
ENST00000527663 PPP1CA-007 protein_coding Homo_sapiens 0 566
ENST00000529724 PPP1CA-005 processed_transcript Homo_sapiens 0 339
ENST00000532446 PPP1CA-004 processed_transcript Homo_sapiens 0 1371
ENST00000535644 RAD9A-009 processed_transcript Homo_sapiens 0 211
ENST00000537694 PPP1CA-009 processed_transcript Homo_sapiens 0 869

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