C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleoporin 93kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000308159 NUP93-001 ENSG00000102900 9606 + 16:56730105-56844769 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000308159
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000308159 11.236±0.00 9.731±0.00 5.353±0.00 6.620±0.00 6.787±0.00 3.468±2.50 10.776±0.00 2.391±1.01 8.624±0.00 3.983±3.02 14.994±4.12 13.200±1.52 38.196±6.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000450 CIL_000450_0002 CGP 16:56730105-56915850

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0005635 TAS nuclear envelope
GO:0005643 IEA:IDA nuclear pore
GO:0005975 TAS carbohydrate metabolic process
GO:0006810 IEA transport
GO:0007077 TAS mitotic nuclear envelope disassembly
GO:0008645 TAS hexose transport
GO:0010827 TAS regulation of glucose transport
GO:0015031 IEA protein transport
GO:0015758 TAS glucose transport
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0017056 IMP structural constituent of nuclear pore
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0031965 IDA nuclear membrane
GO:0034399 IDA nuclear periphery
GO:0044281 TAS small molecule metabolic process
GO:0051028 IEA mRNA transport
GO:0051292 IMP nuclear pore complex assembly
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109547 Nup93-202 protein_coding Mus_musculus 0 3338
ENSMUST00000079961 Nup93-201 protein_coding Mus_musculus 0 3338

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