C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: lysine (K)-specific demethylase 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000308783 KDM2A-201 ENSG00000173120 9606 + 11:67121269-67255062 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartENST00000308783
Transcript ID Bladder Heart
ENST00000308783 2.084±0.00 1.013±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075856 Kdm2a-201 protein_coding Mus_musculus 0 4915
ENSMUST00000047898 Kdm2a-001 protein_coding Mus_musculus 0 4915
ENSMUST00000116571 Kdm2a-005 protein_coding Mus_musculus 0 2025
ENSMUST00000175777 Kdm2a-004 retained_intron Mus_musculus 0 1408
ENSMUST00000175959 Kdm2a-007 protein_coding Mus_musculus 0 1011
ENSMUST00000175682 Kdm2a-003 retained_intron Mus_musculus 0 981
ENSMUST00000176653 Kdm2a-008 protein_coding Mus_musculus 0 959
ENSMUST00000176532 Kdm2a-010 nonsense_mediated_decay Mus_musculus 0 756
ENSMUST00000175978 Kdm2a-009 retained_intron Mus_musculus 0 691
ENSMUST00000176497 Kdm2a-011 nonsense_mediated_decay Mus_musculus 2e-40 172

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