C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075856 Kdm2a-201 ENSMUSG00000054611 10090 - 19:4316170-4397077 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075856
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075856 7.787±2.56 13.619±1.71 5.399±1.19 11.117±3.62 23.082±2.19 15.994±0.62 4.892±2.07 6.954±3.08 4.169±1.88 15.080±4.47 4.564±1.23 17.846±3.18 8.342±3.05 3.642±0.58

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0008270 IEA zinc ion binding
GO:0045322 IDA unmethylated CpG binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308783 KDM2A-201 protein_coding Homo_sapiens 0 4915
ENST00000398645 KDM2A-001 protein_coding Homo_sapiens 0 3727
ENST00000517637 KDM2A-009 processed_transcript Homo_sapiens 3e-30 135
ENST00000524657 KDM2A-006 processed_transcript Homo_sapiens 0 2386
ENST00000525379 KDM2A-005 processed_transcript Homo_sapiens 0 435
ENST00000526258 KDM2A-004 processed_transcript Homo_sapiens 0 5594
ENST00000527157 KDM2A-012 processed_transcript Homo_sapiens 0 368
ENST00000528380 KDM2A-011 processed_transcript Homo_sapiens 0 333
ENST00000529006 KDM2A-002 protein_coding Homo_sapiens 0 6924
ENST00000530342 KDM2A-010 protein_coding Homo_sapiens 0 3515
ENST00000531696 KDM2A-003 processed_transcript Homo_sapiens 0 4612

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